RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 CLK2P49760 499 aaKnown RBP26.02■■□□□ 1.76
TNFRSF25-206ENST00000414040 PFKFB3Q16875 520 aaPredicted RBP26.02■■□□□ 1.76
TNFRSF25-206ENST00000414040 CNKSR3Q6P9H4 555 aa26.02■■□□□ 1.76
TNFRSF25-206ENST00000414040 LMBR1Q8WVP7 490 aa26.02■■□□□ 1.76
TNFRSF25-206ENST00000414040 REV3LO60673 3130 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 ARP10275 920 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 ADAM17P78536 824 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 PKN1Q16512 942 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 GIMAP8Q8ND71 665 aaPredicted RBP26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 PHKBQ93100 1093 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 CDHR1Q96JP9 859 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 MXRA8Q9BRK3 442 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 CERS4Q9HA82 394 aa26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 ZNF215Q9UL58 517 aaPredicted RBP26.01■■□□□ 1.75
TNFRSF25-206ENST00000414040 LOXHD1Q8IVV2 1947 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 hCG_1984214I3L0E3 225 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 CTSHP09668 335 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 SCG2P13521 617 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 MARK3P27448 753 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 ZNF713Q8N859 430 aaPredicted RBP26■■□□□ 1.75
TNFRSF25-206ENST00000414040 PHOSPHO2Q8TCD6 241 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 PPM1EQ8WY54 764 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 GAS2L1Q99501 681 aaPredicted RBP26■■□□□ 1.75
TNFRSF25-206ENST00000414040 EHMT1Q9H9B1 1298 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 NCOA5Q9HCD5 579 aaKnown RBP26■■□□□ 1.75
TNFRSF25-206ENST00000414040 PRDM6Q9NQX0 595 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 KCNH7Q9NS40 1196 aa26■■□□□ 1.75
TNFRSF25-206ENST00000414040 WDR81Q562E7 1941 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 EPOPA6NHQ4 379 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 RSPH10B2B2RC85 870 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 RFXAPO00287 272 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 RSPH10BP0C881 870 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 KCNJ6P48051 423 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 ARHGAP4P98171 946 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 NTRK3Q16288 839 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 JAKMIP3Q5VZ66 844 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 FBXL16Q8N461 479 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 PCYT2Q99447 389 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 TRANK1O15050 2925 aa25.99■■□□□ 1.75
TNFRSF25-206ENST00000414040 LCHNA4D1U4 455 aa25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 PARNO95453 639 aaKnown RBP25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 SREBF1P36956 1147 aa25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 CCT2P78371 535 aaKnown RBP25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 ITGB3BPQ13352 177 aaPredicted RBP25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 TOB2Q14106 344 aaPredicted RBP25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 RUFY4Q6ZNE9 571 aa25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 SEPT1Q8WYJ6 367 aa25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 ZBTB10Q96DT7 871 aa25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 LARP6Q9BRS8 491 aaKnown RBP25.98■■□□□ 1.75
TNFRSF25-206ENST00000414040 LGR5O75473 907 aa25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 FOSP01100 380 aaPredicted RBP25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 IGFBP4P22692 258 aa25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 TAP1Q03518 808 aa25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 DBF4BQ8NFT6 615 aa25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 UIMC1Q96RL1 719 aa25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 JPH1Q9HDC5 661 aaPredicted RBP25.97■■□□□ 1.75
TNFRSF25-206ENST00000414040 CCDC196A0A1B0GTZ2 297 aa25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 PRPF3O43395 683 aaKnown RBP25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 PSMA5P28066 241 aa25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 PDIA3P30101 505 aaKnown RBP25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 AP3B2Q13367 1082 aa25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 MKRN4PQ13434 485 aaPredicted RBP25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 CEP55Q53EZ4 464 aa25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 RUFY3Q7L099 469 aa25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 COL25A1Q9BXS0 654 aaPredicted RBP25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 UPF3BQ9BZI7 483 aaKnown RBP25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 ZSWIM6Q9HCJ5 1215 aa25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 AGO4Q9HCK5 861 aaKnown RBP25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 SLC9A2Q9UBY0 812 aa25.96■■□□□ 1.75
TNFRSF25-206ENST00000414040 ABHD14A-ACY1A0A1B0GW23 586 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 FAM86B1E9PN63 330 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 TLL1O43897 1013 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 FAM86B2P0C5J1 330 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 CCDC85BQ15834 202 aaPredicted RBP25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 FAM117BQ6P1L5 589 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 RASGRP4Q8TDF6 673 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 CRYGNQ8WXF5 182 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 GLG1Q92896 1179 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 ZMYND12Q9H0C1 365 aa25.95■■□□□ 1.74
TNFRSF25-206ENST00000414040 EMSYQ7Z589 1322 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 NRCAMQ92823 1304 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 ESYT2A0FGR8 921 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 MEIS1O00470 390 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 MAFGO15525 162 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 GNAT1P11488 350 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 EVCP57679 992 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 PPFIA1Q13136 1202 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 IKBKEQ14164 716 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 GRIK4Q16099 956 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 PLEKHG4Q58EX7 1191 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 MARCH8Q5T0T0 291 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 SLC26A6Q9BXS9 759 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 ERAP1Q9NZ08 941 aa25.94■■□□□ 1.74
TNFRSF25-206ENST00000414040 CUL9Q8IWT3 2517 aa25.93■■□□□ 1.74
TNFRSF25-206ENST00000414040 NFASCO94856 1347 aa25.93■■□□□ 1.74
TNFRSF25-206ENST00000414040 DDX39AO00148 427 aaKnown RBP25.93■■□□□ 1.74
TNFRSF25-206ENST00000414040 ACTR2P61160 394 aa25.93■■□□□ 1.74
TNFRSF25-206ENST00000414040 TEX2Q8IWB9 1127 aa25.93■■□□□ 1.74
TNFRSF25-206ENST00000414040 PPP4R2Q9NY27 417 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms