RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TYW1BQ6NUM6 668 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 PPP1R18Q6NYC8 613 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 PIBF1Q8WXW3 757 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 VWCEQ96DN2 955 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 GLT1D1Q96MS3 346 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 ZMYND12Q9H0C1 365 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 SEC63Q9UGP8 760 aaKnown RBP19.3■□□□□ 0.68
PTPRC-206ENST00000413409 COG5Q9UP83 839 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 DIS3Q9Y2L1 958 aaKnown RBP19.3■□□□□ 0.68
PTPRC-206ENST00000413409 MYH4Q9Y623 1939 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 CCDC194A0A1B0GVG4 234 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 IKBKBO14920 756 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 ADCY6O43306 1168 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
PTPRC-206ENST00000413409 SNAI1O95863 264 aaPredicted RBP19.29■□□□□ 0.68
PTPRC-206ENST00000413409 CD4P01730 458 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 ASGR1P07306 291 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 ORC2Q13416 577 aaPredicted RBP19.29■□□□□ 0.68
PTPRC-206ENST00000413409 KRT25Q7Z3Z0 450 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 AOPEPQ8N6M6 819 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 MRFAP1L1Q96HT8 127 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 PCDHA11Q9Y5I1 949 aa19.29■□□□□ 0.68
PTPRC-206ENST00000413409 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTPRC-206ENST00000413409 BAZ2BQ9UIF8 2168 aaKnown RBP19.29■□□□□ 0.68
PTPRC-206ENST00000413409 WNT7AO00755 349 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 FLOT1O75955 427 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 GOLGA8HP0CJ92 632 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 CST5P28325 142 aaPredicted RBP19.28■□□□□ 0.68
PTPRC-206ENST00000413409 GNA11P29992 359 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 TPM4P67936 248 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 POSTNQ15063 836 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 ZNF174Q15697 407 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 NT5DC1Q5TFE4 455 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 TRIML1Q8N9V2 468 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 ERCC4Q92889 916 aaPredicted RBP19.28■□□□□ 0.68
PTPRC-206ENST00000413409 VTI1AQ96AJ9 217 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 TRIM5Q9C035 493 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 CERS4Q9HA82 394 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 C6orf50Q9HD87 102 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 FAM184BQ9ULE4 1060 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 PCDHA6Q9UN73 950 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 PCDHA8Q9Y5H6 950 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 BRWD1Q9NSI6 2320 aa19.28■□□□□ 0.68
PTPRC-206ENST00000413409 A0A0U1RQG5 324 aaPredicted RBP19.27■□□□□ 0.68
PTPRC-206ENST00000413409 SMTNL1A8MU46 457 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 LAD1O00515 517 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 POLR2DO15514 142 aaKnown RBP19.27■□□□□ 0.68
PTPRC-206ENST00000413409 DUSP11O75319 330 aaKnown RBP19.27■□□□□ 0.68
PTPRC-206ENST00000413409 SLC25A27O95847 323 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 NAPAP54920 295 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 ZNF543Q08ER8 600 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 PTGDRQ13258 359 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 PNOCQ13519 176 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 GPATCH4Q5T3I0 446 aaKnown RBP19.27■□□□□ 0.68
PTPRC-206ENST00000413409 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.68
PTPRC-206ENST00000413409 RASGRP2Q7LDG7 609 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 SIAH1Q8IUQ4 282 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 LRRC47Q8N1G4 583 aaKnown RBP19.27■□□□□ 0.68
PTPRC-206ENST00000413409 MTIF3Q9H2K0 278 aaKnown RBP19.27■□□□□ 0.68
PTPRC-206ENST00000413409 MTMR7Q9Y216 660 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 SLC4A7Q9Y6M7 1214 aa19.27■□□□□ 0.68
PTPRC-206ENST00000413409 NHLH1Q02575 133 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 KCTD2Q14681 263 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 SPECC1Q5M775 1068 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 RIOX2Q8IUF8 465 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 SPICE1Q8N0Z3 855 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 HLA-CQ95604 372 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 SERTAD1Q9UHV2 236 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 ADAMTS5Q9UNA0 930 aa19.26■□□□□ 0.67
PTPRC-206ENST00000413409 PRR33A8MZF0 331 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 ADAMTS3O15072 1205 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 GTPBP6O43824 516 aaPredicted RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 C6orf222P0C671 652 aaPredicted RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 SLFN14P0C7P3 912 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 LONP1P36776 959 aaKnown RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 CCL23P55773 120 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 CLEC10AQ8IUN9 316 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 C4orf32Q8N8J7 132 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 MKL1Q969V6 931 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 WNT8AQ9H1J5 351 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 CLIP2Q9UDT6 1046 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 DACH1Q9UI36 760 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 A0A087WWV3 80 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 BIN1O00499 593 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 MPHOSPH10O00566 681 aaKnown RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 TLR3O15455 904 aaKnown RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 ARHGEF15O94989 841 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 CA3P07451 260 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 PRPHP41219 470 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 SARSP49591 514 aaKnown RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 PCSK9Q8NBP7 692 aaKnown RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 SPATA20Q8TB22 786 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 DCAF4Q8WV16 495 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 SMARCE1Q969G3 411 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 PIGSQ96S52 555 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 UPF3AQ9H1J1 476 aaKnown RBP19.25■□□□□ 0.67
PTPRC-206ENST00000413409 HIPK3Q9H422 1215 aa19.25■□□□□ 0.67
PTPRC-206ENST00000413409 FBXO28Q9NVF7 368 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 257.6 ms