RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 CERS5Q8N5B7 392 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 TDRD7Q8NHU6 1098 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 CCDC74AQ96AQ1 378 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 BORCS6Q96GS4 357 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 ZBED3Q96IU2 234 aaPredicted RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 COX4I2Q96KJ9 171 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 FAM84BQ96KN1 310 aaPredicted RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 ATP13A1Q9HD20 1204 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 CACNA2D2Q9NY47 1150 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 EGFL7Q9UHF1 273 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 GPN3Q9UHW5 284 aaPredicted RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 SCAF8Q9UPN6 1271 aaKnown RBP6.5□□□□□ -1.37
LINC00342-201ENST00000412393 AK9Q5TCS8 1911 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 FAM205AQ6ZU69 1335 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 KIF16BQ96L93 1317 aa6.5□□□□□ -1.37
LINC00342-201ENST00000412393 GADD45BO75293 160 aaPredicted RBP6.49□□□□□ -1.37
LINC00342-201ENST00000412393 LRIG2O94898 1065 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 PDE8BO95263 885 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 NF2P35240 595 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 RFX5P48382 616 aaPredicted RBP6.49□□□□□ -1.37
LINC00342-201ENST00000412393 FKBP1BP68106 108 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 PRAMEF18Q5VWM3 479 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 DTHD1Q6ZMT9 781 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 FBXO33Q7Z6M2 555 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 VPS37DQ86XT2 251 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 MFSD4AQ8N468 514 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 KLHDC4Q8TBB5 520 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 HSPA12BQ96MM6 686 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 HDAC5Q9UQL6 1122 aa6.49□□□□□ -1.37
LINC00342-201ENST00000412393 UBE2Q2LH0YL09 131 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 EYA2O00167 538 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 IPO8O15397 1037 aaKnown RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 CA12O43570 354 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 NDUFB5O43674 189 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 MYO1BO43795 1136 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 FOXD2O60548 495 aaPredicted RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 FRAT2O75474 233 aaPredicted RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 IFIT1P09914 478 aaKnown RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 NME2P22392 152 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 NTF4P34130 210 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 RBM5P52756 815 aaKnown RBP eCLIP6.48□□□□□ -1.375e-10■■■■□ 19.6
LINC00342-201ENST00000412393 KIF23Q02241 960 aaPredicted RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 RING1Q06587 406 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 CFAP100Q494V2 611 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 CAVIN4Q5BKX8 364 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 MFSD14BQ5SR56 506 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 INTS3Q68E01 1043 aaKnown RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 ZNF746Q6NUN9 644 aaPredicted RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 MOB2Q70IA6 237 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 FAM43AQ8N2R8 423 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 VGLL2Q8N8G2 317 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 ARHGAP45Q92619 1136 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 CCDC97Q96F63 343 aaPredicted RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 PKNOX2Q96KN3 472 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 MEIS3Q99687 375 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 SERPINA10Q9UK55 444 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 TTF2Q9UNY4 1162 aaKnown RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 PCDHAC2Q9Y5I4 1007 aa6.48□□□□□ -1.37
LINC00342-201ENST00000412393 LRRFIP2Q9Y608 721 aaKnown RBP6.48□□□□□ -1.37
LINC00342-201ENST00000412393 COL1A1P02452 1464 aaPredicted RBP6.47□□□□□ -1.37
LINC00342-201ENST00000412393 MYH2Q9UKX2 1941 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 CLRN2A0PK11 232 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 BCAR3O75815 825 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 SLC5A1P13866 664 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 SYN1P17600 705 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 FGFR2P21802 821 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 ZNF252P-AS1Q0IIN9 211 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 CHAF1AQ13111 956 aaPredicted RBP6.47□□□□□ -1.37
LINC00342-201ENST00000412393 GRM2Q14416 872 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 PUM3Q15397 648 aaKnown RBP6.47□□□□□ -1.37
LINC00342-201ENST00000412393 GLIPR1L2Q4G1C9 344 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 SFRP5Q5T4F7 317 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 ATG9AQ7Z3C6 839 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 ARMC9Q7Z3E5 817 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 RASAL3Q86YV0 1011 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 FRAT1Q92837 279 aaPredicted RBP6.47□□□□□ -1.37
LINC00342-201ENST00000412393 PRMT6Q96LA8 375 aaPredicted RBP6.47□□□□□ -1.37
LINC00342-201ENST00000412393 FAM129BQ96TA1 746 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 SIL1Q9H173 461 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 DEFB129Q9H1M3 183 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 ZCCHC4Q9H5U6 513 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 VEZTQ9HBM0 779 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 PICK1Q9NRD5 415 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 RCAN3Q9UKA8 241 aa6.47□□□□□ -1.37
LINC00342-201ENST00000412393 OTOFQ9HC10 1997 aa6.46□□□□□ -1.37
LINC00342-201ENST00000412393 CIAO1O76071 339 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 ABL1P00519 1130 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 GNAI3P08754 354 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 TRIM27P14373 513 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 CRKP46108 304 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 ORC1Q13415 861 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 PRKG1Q13976 671 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 ATP2B3Q16720 1220 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 ATF7IPQ6VMQ6 1270 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 ARMCX6Q7L4S7 300 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 GPBAR1Q8TDU6 330 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 TBC1D22AQ8WUA7 517 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 MYLIPQ8WY64 445 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 LPIN2Q92539 896 aa6.46□□□□□ -1.38
LINC00342-201ENST00000412393 TDRD3Q9H7E2 651 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms