RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 H3BRB1 525 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 LGR5O75473 907 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 GJB2P29033 226 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 HOXC8P31273 242 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 ACTR2P61160 394 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 HIC1Q14526 733 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 KIAA0753Q2KHM9 967 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 LETM2Q2VYF4 491 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 PPP4R3AQ6IN85 833 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 ETNPPLQ8TBG4 499 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 SEPT1Q8WYJ6 367 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 SNX21Q969T3 373 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 UIMC1Q96RL1 719 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 SDF4Q9BRK5 362 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 KATNAL1Q9BW62 490 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 TRPV6Q9H1D0 765 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 TUT1Q9H6E5 874 aaKnown RBP14.94□□□□□ -0.02
HDAC8-210ENST00000412342 TRMT13Q9NUP7 481 aaKnown RBP14.94□□□□□ -0.02
HDAC8-210ENST00000412342 TANC1Q9C0D5 1861 aa14.94□□□□□ -0.02
HDAC8-210ENST00000412342 IGKV6D-21A0A0A0MT36 114 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 B3GNT9Q6UX72 402 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 ABHD15Q6UXT9 468 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 GJA10Q969M2 543 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 GDF15Q99988 308 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 FOXP1Q9H334 677 aaPredicted RBP14.93□□□□□ -0.02
HDAC8-210ENST00000412342 KCNMB3Q9NPA1 279 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 TBC1D22BQ9NU19 505 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 HDAC6Q9UBN7 1215 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 GTF2IRD1Q9UHL9 959 aa14.93□□□□□ -0.02
HDAC8-210ENST00000412342 K7ELQ4 463 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 DDX39AO00148 427 aaKnown RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 PSMD10O75832 226 aa14.92□□□□□ -0.02
HDAC8-210ENST00000412342 GCFC2P16383 781 aaKnown RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 GDF6Q6KF10 455 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 ZNF746Q6NUN9 644 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 RIT2Q99578 217 aa14.92□□□□□ -0.02
HDAC8-210ENST00000412342 PRDM5Q9NQX1 630 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 TMEM39AQ9NV64 488 aa14.92□□□□□ -0.02
HDAC8-210ENST00000412342 DDX25Q9UHL0 483 aaKnown RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.92□□□□□ -0.02
HDAC8-210ENST00000412342 TLR3O15455 904 aaKnown RBP14.91□□□□□ -0.02
HDAC8-210ENST00000412342 SUPT20HL2P0C7V6 817 aa14.91□□□□□ -0.02
HDAC8-210ENST00000412342 U2AF2P26368 475 aaKnown RBP eCLIP14.91□□□□□ -0.02
HDAC8-210ENST00000412342 MAGEA10P43363 369 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-210ENST00000412342 SAFBQ15424 915 aaKnown RBP eCLIP14.91□□□□□ -0.02
HDAC8-210ENST00000412342 FAM47CQ5HY64 1035 aa14.91□□□□□ -0.02
HDAC8-210ENST00000412342 CCDC60Q8IWA6 550 aaPredicted RBP14.91□□□□□ -0.02
HDAC8-210ENST00000412342 HAS1Q92839 578 aa14.91□□□□□ -0.02
HDAC8-210ENST00000412342 RNPEPQ9H4A4 650 aa14.91□□□□□ -0.02
HDAC8-210ENST00000412342 SMC3Q9UQE7 1217 aa14.91□□□□□ -0.02
HDAC8-210ENST00000412342 KIF3AQ9Y496 699 aa14.91□□□□□ -0.02
HDAC8-210ENST00000412342 MYH9P35579 1960 aaKnown RBP14.91□□□□□ -0.02
HDAC8-210ENST00000412342 UMODL1Q5DID0 1318 aa14.91□□□□□ -0.02
HDAC8-210ENST00000412342 RANBP2P49792 3224 aaKnown RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 CCNT1O60563 726 aaKnown RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 SMIM10L2AP0DMW4 78 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 SMIM10L2BP0DMW5 78 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 CYP2C9P11712 490 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 CHMP4BP1P59074 171 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 ADAM17P78536 824 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 KRT76Q01546 638 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 LRCH2Q5VUJ6 765 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 NOSTRINQ8IVI9 506 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 SMAP1Q8IYB5 467 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 C7orf31Q8N865 590 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 AFAP1L1Q8TED9 768 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 DHX38Q92620 1227 aaKnown RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 INTS4Q96HW7 963 aaKnown RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 NAP1L4Q99733 375 aaKnown RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 NOC4LQ9BVI4 516 aaKnown RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 UNC45AQ9H3U1 944 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 SMARCAD1Q9H4L7 1026 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 ERAP1Q9NZ08 941 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 VAV3Q9UKW4 847 aa14.9□□□□□ -0.02
HDAC8-210ENST00000412342 ZNF215Q9UL58 517 aaPredicted RBP14.9□□□□□ -0.02
HDAC8-210ENST00000412342 SCN5AQ14524 2016 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 KAT6AQ92794 2004 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 TBX3O15119 743 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 GAS7O60861 476 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 TIMP1P01033 207 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 ZNF200P98182 395 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-210ENST00000412342 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
HDAC8-210ENST00000412342 PTGISQ16647 500 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 PLPPR4Q7Z2D5 763 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 BADQ92934 168 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 WNT8BQ93098 351 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 TEKT3Q9BXF9 490 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 WNT8AQ9H1J5 351 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 PRKAG2Q9UGJ0 569 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 IGSF9BQ9UPX0 1349 aa14.89□□□□□ -0.03
HDAC8-210ENST00000412342 SIP14410 1827 aa14.88□□□□□ -0.03
HDAC8-210ENST00000412342 RAG1P15918 1043 aa14.88□□□□□ -0.03
HDAC8-210ENST00000412342 ATP4AP20648 1035 aa14.88□□□□□ -0.03
HDAC8-210ENST00000412342 MARK3P27448 753 aa14.88□□□□□ -0.03
HDAC8-210ENST00000412342 BMP8BP34820 402 aa14.88□□□□□ -0.03
HDAC8-210ENST00000412342 TOB1P50616 345 aaPredicted RBP14.88□□□□□ -0.03
HDAC8-210ENST00000412342 STAT5BP51692 787 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms