RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 WASF3Q9UPY6 502 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 INVSQ9Y283 1065 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 MRPS23Q9Y3D9 190 aaKnown RBP7.15□□□□□ -1.26
HDAC9-205ENST00000411993 PCDHA8Q9Y5H6 950 aa7.15□□□□□ -1.26
HDAC9-205ENST00000411993 FAM221BA6H8Z2 402 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 ZNF536O15090 1300 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 FBXO21O94952 628 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 C6orf222P0C671 652 aaPredicted RBP7.14□□□□□ -1.27
HDAC9-205ENST00000411993 ST5P78524 1137 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 LONRF2Q1L5Z9 754 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 SPATS1Q496A3 300 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 PHF19Q5T6S3 580 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 EP400NLQ6ZTU2 488 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 PROSER1Q86XN7 944 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 DTX3Q8N9I9 347 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 FBXW5Q969U6 566 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 YTHDC1Q96MU7 727 aaKnown RBP7.14□□□□□ -1.27
HDAC9-205ENST00000411993 CNOT11Q9UKZ1 510 aaKnown RBP7.14□□□□□ -1.27
HDAC9-205ENST00000411993 TELO2Q9Y4R8 837 aa7.14□□□□□ -1.27
HDAC9-205ENST00000411993 ENO2P09104 434 aaPredicted RBP7.13□□□□□ -1.27
HDAC9-205ENST00000411993 SRGAP2CP0DJJ0 459 aa7.13□□□□□ -1.27
HDAC9-205ENST00000411993 EPHA5P54756 1037 aa7.13□□□□□ -1.27
HDAC9-205ENST00000411993 SKIDA1Q1XH10 827 aa7.13□□□□□ -1.27
HDAC9-205ENST00000411993 ZC3H12BQ5HYM0 836 aaKnown RBP7.13□□□□□ -1.27
HDAC9-205ENST00000411993 PLEKHH3Q7Z736 793 aa7.13□□□□□ -1.27
HDAC9-205ENST00000411993 PLATP00750 562 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 ITGB3P05106 788 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 CKMP06732 381 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 KRT15P19012 456 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 GLRBP48167 497 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 EFEMP1Q12805 493 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 GPR19Q15760 415 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 ZNF827Q17R98 1081 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 BTBD8Q5XKL5 378 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 ARHGAP36Q6ZRI8 547 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 NLGN4XQ8N0W4 816 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 DNAJC7Q99615 494 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 BARX1Q9HBU1 254 aaPredicted RBP7.12□□□□□ -1.27
HDAC9-205ENST00000411993 ARHGAP20Q9P2F6 1191 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 NDOR1Q9UHB4 597 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 ZFP69BQ9UJL9 534 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 SRPK3Q9UPE1 567 aa7.12□□□□□ -1.27
HDAC9-205ENST00000411993 ARVCFO00192 962 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 GSTA4O15217 222 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 ADRB1P08588 477 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 PYGMP11217 842 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 PFKPQ01813 784 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 SURF1Q15526 300 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 SMAD2Q15796 467 aaKnown RBP7.11□□□□□ -1.27
HDAC9-205ENST00000411993 TBC1D10BQ4KMP7 808 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-205ENST00000411993 FAM47CQ5HY64 1035 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 ZC3H7AQ8IWR0 971 aaKnown RBP7.11□□□□□ -1.27
HDAC9-205ENST00000411993 PCDH19Q8TAB3 1148 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 SH3RF2Q8TEC5 729 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 MKL1Q969V6 931 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 PDGFDQ9GZP0 370 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-205ENST00000411993 RIC8BQ9NVN3 520 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 PCDHA9Q9Y5H5 950 aa7.11□□□□□ -1.27
HDAC9-205ENST00000411993 TCRBV5S4A2TA0A5A2 114 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 WNT9AO14904 365 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 B4GALT3O60512 393 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 CRTAMO95727 393 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 PDE6AP16499 860 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 DNM2P50570 870 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 CRY1Q16526 586 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 FIGNQ5HY92 759 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 PTRH1Q86Y79 214 aaKnown RBP7.1□□□□□ -1.27
HDAC9-205ENST00000411993 KLHL36Q8N4N3 616 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 ZDHHC9Q9Y397 364 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 ATP23Q9Y6H3 246 aa7.1□□□□□ -1.27
HDAC9-205ENST00000411993 CCDC66A2RUB6 948 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 ZNF839A8K0R7 811 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 ACOT7O00154 380 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 LAMTOR5O43504 91 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 EFCAB14O75071 495 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 CHGBP05060 677 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 PTPN1P18031 435 aaKnown RBP7.09□□□□□ -1.27
HDAC9-205ENST00000411993 NFATC3Q12968 1075 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 GLB1LQ6UWU2 654 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 C16orf59Q7L2K0 433 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 KBTBD2Q8IY47 623 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 STPG3Q8N7X2 389 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 ZSWIM2Q8NEG5 633 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 NUDT10Q8NFP7 164 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 KISS1RQ969F8 398 aaPredicted RBP7.09□□□□□ -1.27
HDAC9-205ENST00000411993 MBD6Q96DN6 1003 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 NUDT11Q96G61 164 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 LOXL4Q96JB6 756 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 DNAJC2Q99543 621 aaKnown RBP7.09□□□□□ -1.27
HDAC9-205ENST00000411993 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 SLC52A2Q9HAB3 445 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 ARHGAP28Q9P2N2 729 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 CBLCQ9ULV8 474 aa7.09□□□□□ -1.27
HDAC9-205ENST00000411993 MAN2B1O00754 1011 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 COL6A1P12109 1028 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 GJA4P35212 333 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 HHIPL2Q6UWX4 724 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 OSTM1Q86WC4 334 aa7.08□□□□□ -1.28
HDAC9-205ENST00000411993 IGDCC4Q8TDY8 1250 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms