RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ARHGAP20Q9P2F6 1191 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 ASH2LQ9UBL3 628 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 PTPN22Q9Y2R2 807 aa4.12□□□□□ -1.75
HMGB3P2-201ENST00000411913 H0Y858 1186 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 U2SURPO15042 1029 aaKnown RBP4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 CDC14BO60729 498 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 CR2P20023 1033 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 HNRNPA0Q13151 305 aaKnown RBP4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 PROSER1Q86XN7 944 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 PPIL6Q8IXY8 311 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 IL17DQ8TAD2 202 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 ZNF483Q8TF39 744 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 CACTINQ8WUQ7 758 aaKnown RBP4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 CPLX3Q8WVH0 158 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 LARP4BQ92615 738 aaKnown RBP4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 SPATA32Q96LK8 384 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 CARD11Q9BXL7 1154 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 KATNBL1Q9H079 304 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 C12orf65Q9H3J6 166 aaKnown RBP4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 LRP2BPQ9P2M1 347 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 OAZ3Q9UMX2 235 aa4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 REXO2Q9Y3B8 237 aaKnown RBP4.11□□□□□ -1.75
HMGB3P2-201ENST00000411913 SLC27A2O14975 620 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 CPP00450 1065 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 LCP1P13796 627 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 ACRV1P26436 265 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 SOX9P48436 509 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 ACBD5Q5T8D3 534 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 CYP4F22Q6NT55 531 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 TTLL11Q8NHH1 800 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 NAF1Q96HR8 494 aaKnown RBP4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 CCDC140Q96MF4 163 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 DPYSL5Q9BPU6 564 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 DMRT1Q9Y5R6 373 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 SLC30A1Q9Y6M5 507 aa4.1□□□□□ -1.75
HMGB3P2-201ENST00000411913 RAMP2O60895 175 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 ITGAVP06756 1048 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 ENO2P09104 434 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 HIBADHP31937 336 aaKnown RBP4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 CASP7P55210 303 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 RACK1P63244 317 aaKnown RBP4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 FANCCQ00597 558 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 PFKPQ01813 784 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 PAK2Q13177 524 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 NCAPHQ15003 741 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 PRSS53Q2L4Q9 553 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 MAMDC4Q6UXC1 1216 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 NPM2Q86SE8 214 aaKnown RBP4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 ZNF808Q8N4W9 903 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 KREMEN2Q8NCW0 462 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 CLEC4DQ8WXI8 215 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 AGAP2Q99490 1192 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 SLC6A20Q9NP91 592 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 METTL5Q9NRN9 209 aaKnown RBP4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 KCND1Q9NSA2 647 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 DDX41Q9UJV9 622 aaKnown RBP4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 NR2E1Q9Y466 385 aa4.09□□□□□ -1.75
HMGB3P2-201ENST00000411913 TBX1O43435 398 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 SCG5P05408 212 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 DNAJA1P31689 397 aaKnown RBP4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 ATXN1P54253 815 aaKnown RBP4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 NOLC1Q14978 699 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 RNF151Q2KHN1 245 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 SV2CQ496J9 727 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 PAN2Q504Q3 1202 aaKnown RBP4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 ZMAT1Q5H9K5 638 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 LDLRAD1Q5T700 205 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 FNDC7Q5VTL7 733 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 SCUBE1Q8IWY4 988 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 RBM12BQ8IXT5 1001 aaKnown RBP4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 PIP4K2CQ8TBX8 421 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 VOPP1Q96AW1 172 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 CLIP3Q96DZ5 547 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 TACO1Q9BSH4 297 aaKnown RBP4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 JAM3Q9BX67 310 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 PLA2G12BQ9BX93 195 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 NUB1Q9Y5A7 615 aa4.08□□□□□ -1.76
HMGB3P2-201ENST00000411913 ESYT3A0FGR9 886 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 CUTAO60888 179 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 FAHP16930 419 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 POLD1P28340 1107 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 RPS19P39019 145 aaKnown RBP4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 RRADP55042 308 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 HHEXQ03014 270 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 TUSC3Q13454 348 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 TESK1Q15569 626 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 SF1Q15637 639 aaKnown RBP4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 CSRP2Q16527 193 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 ZNF627Q7L945 461 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 ZNF654Q8IZM8 581 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 SHDQ96IW2 340 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 PRRX2Q99811 253 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 TTPALQ9BTX7 342 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 BACH2Q9BYV9 841 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 TLR9Q9NR96 1032 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 AURKAIP1Q9NWT8 199 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
HMGB3P2-201ENST00000411913 BMP5P22003 454 aa4.06□□□□□ -1.76
HMGB3P2-201ENST00000411913 CD276Q5ZPR3 534 aa4.06□□□□□ -1.76
HMGB3P2-201ENST00000411913 SGMS1Q86VZ5 419 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms