RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 FAM117BQ6P1L5 589 aa25.56■■□□□ 1.68
MSH6-202ENST00000411819 LMBR1Q8WVP7 490 aa25.56■■□□□ 1.68
MSH6-202ENST00000411819 SYMPKQ92797 1274 aaKnown RBP25.56■■□□□ 1.68
MSH6-202ENST00000411819 PGBD1Q96JS3 809 aa25.56■■□□□ 1.68
MSH6-202ENST00000411819 V9GY48 417 aaPredicted RBP25.56■■□□□ 1.68
MSH6-202ENST00000411819 LCHNA4D1U4 455 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 EPOPA6NHQ4 379 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 hCG_1984214I3L0E3 225 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 CPA1P15085 419 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 TJAP1Q5JTD0 557 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 ZNF713Q8N859 430 aaPredicted RBP25.55■■□□□ 1.68
MSH6-202ENST00000411819 DBF4BQ8NFT6 615 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 RIC8AQ9NPQ8 531 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 JADE2Q9NQC1 790 aa25.55■■□□□ 1.68
MSH6-202ENST00000411819 CAND2O75155 1236 aa25.54■■□□□ 1.68
MSH6-202ENST00000411819 GJB5O95377 273 aa25.54■■□□□ 1.68
MSH6-202ENST00000411819 MARK3P27448 753 aa25.54■■□□□ 1.68
MSH6-202ENST00000411819 CDC27P30260 824 aa25.54■■□□□ 1.68
MSH6-202ENST00000411819 FUT2Q10981 343 aa25.54■■□□□ 1.68
MSH6-202ENST00000411819 SPRED2Q7Z698 418 aa25.54■■□□□ 1.68
MSH6-202ENST00000411819 SEPT1Q8WYJ6 367 aa25.54■■□□□ 1.68
MSH6-202ENST00000411819 JAKMIP1Q96N16 626 aaKnown RBP25.54■■□□□ 1.68
MSH6-202ENST00000411819 STXBP3O00186 592 aa25.53■■□□□ 1.68
MSH6-202ENST00000411819 METAP2P50579 478 aaKnown RBP eCLIP25.53■■□□□ 1.68
MSH6-202ENST00000411819 GLG1Q92896 1179 aa25.53■■□□□ 1.68
MSH6-202ENST00000411819 ANO3Q9BYT9 981 aa25.53■■□□□ 1.68
MSH6-202ENST00000411819 TSPYL2Q9H2G4 693 aaPredicted RBP25.53■■□□□ 1.68
MSH6-202ENST00000411819 NRCAMQ92823 1304 aa25.53■■□□□ 1.68
MSH6-202ENST00000411819 PRRC2BQ5JSZ5 2229 aaKnown RBP25.53■■□□□ 1.68
MSH6-202ENST00000411819 GSTTP1A0A1W2PQM5 241 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 SMCO2A6NFE2 343 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 MAFGO15525 162 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 AMHP03971 560 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 RCAN1P53805 252 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 APOBRQ0VD83 1088 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 PPFIA1Q13136 1202 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 SKIV2LQ15477 1246 aaKnown RBP25.52■■□□□ 1.68
MSH6-202ENST00000411819 PLEKHG4Q58EX7 1191 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.52■■□□□ 1.68
MSH6-202ENST00000411819 Q6ZUG5 572 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 MYOCDQ8IZQ8 938 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 ATXN2LQ8WWM7 1075 aaKnown RBP25.52■■□□□ 1.68
MSH6-202ENST00000411819 SEPT8Q92599 483 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 RAD9AQ99638 391 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 MXRA8Q9BRK3 442 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 JPH1Q9HDC5 661 aaPredicted RBP25.52■■□□□ 1.68
MSH6-202ENST00000411819 FAM217BQ9NTX9 383 aaPredicted RBP25.52■■□□□ 1.68
MSH6-202ENST00000411819 BARHL2Q9NY43 387 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 ERAP1Q9NZ08 941 aa25.52■■□□□ 1.68
MSH6-202ENST00000411819 FOSP01100 380 aaPredicted RBP25.51■■□□□ 1.67
MSH6-202ENST00000411819 BLOC1S2Q6QNY1 142 aa25.51■■□□□ 1.67
MSH6-202ENST00000411819 BRF1Q92994 677 aa25.51■■□□□ 1.67
MSH6-202ENST00000411819 KCNH7Q9NS40 1196 aa25.51■■□□□ 1.67
MSH6-202ENST00000411819 MTUS1Q9ULD2 1270 aa25.51■■□□□ 1.67
MSH6-202ENST00000411819 SNX14Q9Y5W7 946 aa25.51■■□□□ 1.67
MSH6-202ENST00000411819 MTCH2Q9Y6C9 303 aa25.51■■□□□ 1.67
MSH6-202ENST00000411819 CCDC196A0A1B0GTZ2 297 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 HSPA4P34932 840 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 ADAM17P78536 824 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 KRT40Q6A162 431 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 SDF4Q9BRK5 362 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 SMARCAD1Q9H4L7 1026 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 TMEM260Q9NX78 707 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 SLC9A2Q9UBY0 812 aa25.5■■□□□ 1.67
MSH6-202ENST00000411819 SIP14410 1827 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 ADD1P35611 737 aaKnown RBP25.49■■□□□ 1.67
MSH6-202ENST00000411819 GRB10Q13322 594 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 AP3B2Q13367 1082 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 GRIK4Q16099 956 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 TEX2Q8IWB9 1127 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 IL27Q8NEV9 243 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 CYP2W1Q8TAV3 490 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 GDPD5Q8WTR4 605 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 KCNB2Q92953 911 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 GLT8D2Q9H1C3 349 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 TUBE1Q9UJT0 475 aa25.49■■□□□ 1.67
MSH6-202ENST00000411819 REC8O95072 547 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 ZNF76P36508 570 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 IGBP1P78318 339 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 MRPS5P82675 430 aaKnown RBP25.48■■□□□ 1.67
MSH6-202ENST00000411819 CEP55Q53EZ4 464 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 TAF2Q6P1X5 1199 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 RUFY4Q6ZNE9 571 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 ASB2Q96Q27 587 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 OSBPL7Q9BZF2 842 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 AZI2Q9H6S1 392 aa25.48■■□□□ 1.67
MSH6-202ENST00000411819 LINC01553A4QN01 128 aa25.47■■□□□ 1.67
MSH6-202ENST00000411819 ARP10275 920 aa25.47■■□□□ 1.67
MSH6-202ENST00000411819 SCG2P13521 617 aa25.47■■□□□ 1.67
MSH6-202ENST00000411819 POU3F3P20264 500 aaPredicted RBP25.47■■□□□ 1.67
MSH6-202ENST00000411819 PFKFB3Q16875 520 aaPredicted RBP25.47■■□□□ 1.67
MSH6-202ENST00000411819 RSPH3Q86UC2 560 aa25.47■■□□□ 1.67
MSH6-202ENST00000411819 TGS1Q96RS0 853 aaKnown RBP25.47■■□□□ 1.67
MSH6-202ENST00000411819 IFIH1Q9BYX4 1025 aaKnown RBP25.47■■□□□ 1.67
MSH6-202ENST00000411819 INSL6Q9Y581 213 aa25.47■■□□□ 1.67
MSH6-202ENST00000411819 SPTBN5Q9NRC6 3674 aaKnown RBP25.47■■□□□ 1.67
MSH6-202ENST00000411819 NFASCO94856 1347 aa25.46■■□□□ 1.67
MSH6-202ENST00000411819 RPS6KB1P23443 525 aa25.46■■□□□ 1.67
MSH6-202ENST00000411819 SREBF1P36956 1147 aa25.46■■□□□ 1.67
MSH6-202ENST00000411819 CLK2P49760 499 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms