RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 HMGN5P82970 282 aaKnown RBP13.59□□□□□ -0.23
NEDD1-202ENST00000411739 NIPA1Q7RTP0 329 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 TRMT1LQ7Z2T5 733 aaKnown RBP13.59□□□□□ -0.23
NEDD1-202ENST00000411739 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 RNPEPQ9H4A4 650 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 BRMS1Q9HCU9 246 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 CCNT1O60563 726 aaKnown RBP13.58□□□□□ -0.23
NEDD1-202ENST00000411739 CYP2C18P33260 490 aa13.58□□□□□ -0.23
NEDD1-202ENST00000411739 MCM2P49736 904 aa13.58□□□□□ -0.23
NEDD1-202ENST00000411739 PCYT2Q99447 389 aa13.58□□□□□ -0.23
NEDD1-202ENST00000411739 MROH7Q68CQ1 1323 aa13.58□□□□□ -0.24
NEDD1-202ENST00000411739 HAS3O00219 553 aa13.58□□□□□ -0.24
NEDD1-202ENST00000411739 TLR3O15455 904 aaKnown RBP13.58□□□□□ -0.24
NEDD1-202ENST00000411739 CHMP2AO43633 222 aa13.58□□□□□ -0.24
NEDD1-202ENST00000411739 NEK8Q86SG6 692 aa13.58□□□□□ -0.24
NEDD1-202ENST00000411739 GLG1Q92896 1179 aa13.58□□□□□ -0.24
NEDD1-202ENST00000411739 DDX25Q9UHL0 483 aaKnown RBP13.58□□□□□ -0.24
NEDD1-202ENST00000411739 TBX21Q9UL17 535 aa13.58□□□□□ -0.24
NEDD1-202ENST00000411739 KIF28PB7ZC32 967 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 CCL23P55773 120 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 PTGISQ16647 500 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 NFRKBQ6P4R8 1299 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 FAM177A1Q8N128 213 aaPredicted RBP13.57□□□□□ -0.24
NEDD1-202ENST00000411739 FBXO18Q8NFZ0 1043 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 LBHD1Q9BQE6 289 aaPredicted RBP13.57□□□□□ -0.24
NEDD1-202ENST00000411739 SETD4Q9NVD3 440 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 NOD1Q9Y239 953 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 NFASCO94856 1347 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 KIAA0355O15063 1070 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 SETQ01105 290 aaPredicted RBP13.57□□□□□ -0.24
NEDD1-202ENST00000411739 ZBTB10Q96DT7 871 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 CTAGE1Q96RT6 745 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 GDF15Q99988 308 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
NEDD1-202ENST00000411739 SMIM10L2AP0DMW4 78 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 SMIM10L2BP0DMW5 78 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
NEDD1-202ENST00000411739 Q4G0T1 1027 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 KATNAL1Q9BW62 490 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 GTF2IRD1Q9UHL9 959 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 CYP3A7-CYP3A51PA0A087WV96 503 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 BACH1O14867 736 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 CYP3A7P24462 503 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 EPHB4P54760 987 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 WNT8BQ93098 351 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 SCLYQ96I15 445 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 UBE2OQ9C0C9 1292 aaKnown RBP13.56□□□□□ -0.24
NEDD1-202ENST00000411739 SAMM50Q9Y512 469 aa13.56□□□□□ -0.24
NEDD1-202ENST00000411739 GAS7O60861 476 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 TIMP1P01033 207 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 IGBP1P78318 339 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 GNL2Q13823 731 aaKnown RBP13.55□□□□□ -0.24
NEDD1-202ENST00000411739 NBR1Q14596 966 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 ABHD15Q6UXT9 468 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 CCDC60Q8IWA6 550 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-202ENST00000411739 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 MBOAT7Q96N66 472 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 UNC45AQ9H3U1 944 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 TBC1D22BQ9NU19 505 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 TREHO43280 583 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 ACRP10323 421 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 CSF2RAP15509 400 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
NEDD1-202ENST00000411739 ZNF215Q9UL58 517 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-202ENST00000411739 TRIOBPQ9H2D6 2365 aa13.55□□□□□ -0.24
NEDD1-202ENST00000411739 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-202ENST00000411739 STAT5BP51692 787 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 TRAPPC12Q8WVT3 735 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 DHX38Q92620 1227 aaKnown RBP13.54□□□□□ -0.24
NEDD1-202ENST00000411739 WNT8AQ9H1J5 351 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 SMARCAD1Q9H4L7 1026 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 AZI2Q9H6S1 392 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 LAMA3Q16787 3333 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 C17orf102A2RUQ5 167 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 MARCH6O60337 910 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 LGR5O75473 907 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 PSMD10O75832 226 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 ATG7O95352 703 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 SUPT20HL2P0C7V6 817 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 MCM7P33993 719 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 CUL4AQ13619 759 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 ZNF174Q15697 407 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 SPRYD3Q8NCJ5 442 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 HAS1Q92839 578 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 TEKT3Q9BXF9 490 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 ERAP1Q9NZ08 941 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 TRPC6Q9Y210 931 aa13.54□□□□□ -0.24
NEDD1-202ENST00000411739 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-202ENST00000411739 PTPN11Q06124 597 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-202ENST00000411739 PLCB4Q15147 1175 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms