RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 PAN2Q504Q3 1202 aaKnown RBP2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 USP53Q70EK8 1073 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 OTOP3Q7RTS5 596 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 CRACR2BQ8N4Y2 399 aaPredicted RBP2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF503Q96F45 646 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 PHF20Q9BVI0 1012 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 CD244Q9BZW8 370 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 EPB41L1Q9H4G0 881 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 KCND1Q9NSA2 647 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 ACTR10Q9NZ32 417 aa2.65□□□□□ -1.99
RNU2-55P-201ENST00000411146 MUSKO15146 869 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 MYO1BO43795 1136 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 CPP00450 1065 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 C1SP09871 688 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 FAHP16930 419 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 GTF2A2P52657 109 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 ACAP1Q15027 740 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 SURF1Q15526 300 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 SMAD2Q15796 467 aaKnown RBP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 USP39Q53GS9 565 aaKnown RBP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 HABP4Q5JVS0 413 aaKnown RBP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 CD276Q5ZPR3 534 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 LARP4Q71RC2 724 aaKnown RBP eCLIP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 FUKQ8N0W3 1084 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 HNRNPLLQ8WVV9 542 aaKnown RBP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 OSBP2Q969R2 916 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 AJUBAQ96IF1 538 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 LMF1Q96S06 567 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 TMEM209Q96SK2 561 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 ADOQ96SZ5 270 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 DPYSL5Q9BPU6 564 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF341Q9BYN7 854 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 TGIF2Q9GZN2 237 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 IPPKQ9H8X2 491 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF408Q9H9D4 720 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 BARX1Q9HBU1 254 aaPredicted RBP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 NGRNQ9NPE2 291 aaKnown RBP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 HSPBP1Q9NZL4 362 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZFR2Q9UPR6 939 aaKnown RBP2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 TESMINQ9Y4I5 508 aa2.64□□□□□ -1.99
RNU2-55P-201ENST00000411146 ESYT3A0FGR9 886 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 FAM90A27PA6NNH2 459 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 KCNK3O14649 394 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 PRODHO43272 600 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 NARSO43776 548 aaKnown RBP2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 PDE6AP16499 860 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 SELENOPP49908 381 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 RRADP55042 308 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 FHL2Q14192 279 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 NRN1LQ496H8 165 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 FNDC7Q5VTL7 733 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 VASNQ6EMK4 673 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 LBX2Q6XYB7 198 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 PLEKHH3Q7Z736 793 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 GIMAP8Q8ND71 665 aaPredicted RBP2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 NEIL1Q96FI4 390 aaPredicted RBP2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 CCDC140Q96MF4 163 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 CDK5RAP1Q96SZ6 601 aaKnown RBP2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 KATNBL1Q9H079 304 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 IKZF4Q9H2S9 585 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 DLL4Q9NR61 685 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 ARHGEF4Q9NR80 690 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 GPR27Q9NS67 375 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 ARHGAP20Q9P2F6 1191 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 PRKAG3Q9UGI9 489 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 TCAF1Q9Y4C2 921 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 TRAF6Q9Y4K3 522 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 SLC4A7Q9Y6M7 1214 aa2.63□□□□□ -1.99
RNU2-55P-201ENST00000411146 ZNF839A8K0R7 811 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 AMY2AP04746 511 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 NAT2P11245 290 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 AMY2BP19961 511 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 ACO1P21399 889 aaKnown RBP2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 MAP4K2Q12851 820 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 DUSP8Q13202 625 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 SEC23AQ15436 765 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 CHRNA2Q15822 529 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 MIIPQ5JXC2 388 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 FSTL4Q6MZW2 842 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 RNF207Q6ZRF8 634 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 RALYLQ86SE5 291 aaKnown RBP2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 MCF2L2Q86YR7 1114 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 IL17DQ8TAD2 202 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 UHMK1Q8TAS1 419 aaKnown RBP2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 PHOSPHO1Q8TCT1 267 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 KIAA1683Q9H0B3 1180 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 SEC61A2Q9H9S3 476 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 CAPN10Q9HC96 672 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 CDC42EP3Q9UKI2 254 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 DSEQ9UL01 958 aa2.62□□□□□ -1.99
RNU2-55P-201ENST00000411146 FBXO21O94952 628 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 SOD2P04179 222 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 SSBP05455 408 aaKnown RBP eCLIP2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 ENO2P09104 434 aaPredicted RBP2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 FGRP09769 529 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 GRK2P25098 689 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 MC4RP32245 332 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 GRK3P35626 688 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 ADCY8P40145 1251 aa2.61□□□□□ -1.99
RNU2-55P-201ENST00000411146 EPHA5P54756 1037 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms