RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MED23Q9ULK4 1368 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 ARIH2O95376 493 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 CHEK2O96017 543 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 ELF2Q15723 593 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 TAGAPQ8N103 731 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 SENP1Q9P0U3 644 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 SLMAPQ14BN4 828 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 ME3Q16798 604 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 CHL1O00533 1208 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 PRKCQQ04759 706 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 BAZ2BQ9UIF8 2168 aaKnown RBP12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 XDHP47989 1333 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 CLTAP09496 248 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 PTH1RQ03431 593 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 OR6B2Q6IFH4 312 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 DNAJC24Q6P3W2 148 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 UBE2TQ9NPD8 197 aaPredicted RBP12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 SAMD9Q5K651 1589 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 TSPY1Q01534 308 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 TRIM58Q8NG06 486 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 ZCWPW1Q9H0M4 648 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 GCNT4Q9P109 453 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 FAF1Q9UNN5 650 aaPredicted RBP12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 UPP2O95045 317 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 KCNJ6P48051 423 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 WASHC5Q12768 1159 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 AOC3Q16853 763 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 KCNH4Q9UQ05 1017 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 PSAPP07602 524 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 MSH2P43246 934 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 HOXA13P31271 388 aaPredicted RBP12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 FAM196AQ6ZSG2 479 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 TUBB2AQ13885 445 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 SGO2Q562F6 1265 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 CC2D1AQ6P1N0 951 aaPredicted RBP12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 ACCSQ96QU6 501 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 TUBB2BQ9BVA1 445 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 DAAM1Q9Y4D1 1078 aa12.1□□□□□ -0.47
PRPF40A-202ENST00000410080 LOC102724428A0A0B4J2F2 783 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 SIK1P57059 783 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 HIF1AQ16665 826 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CYP4F22Q6NT55 531 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 SMAP1Q8IYB5 467 aaPredicted RBP12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 NLGN1Q8N2Q7 840 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CAPN15O75808 1086 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CACNB2Q08289 660 aaPredicted RBP12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 MFSD4BQ5TF39 518 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 PHLDB3Q6NSJ2 640 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 SCYL3Q8IZE3 742 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 B4GALNT2Q8NHY0 566 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 MAML1Q92585 1016 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 SELENONQ9NZV5 590 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CFLARO15519 480 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 DDHD2O94830 711 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 ARHGAP25P42331 645 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CENPAP49450 140 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 PTGDRQ13258 359 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 MFSD14CQ5VZR4 134 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 PUS3Q9BZE2 481 aaKnown RBP12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 HPS4Q9NQG7 708 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 PSMC2P35998 433 aaKnown RBP12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CYP27A1Q02318 531 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 NME3Q13232 169 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 PPP2R5BQ15173 497 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 ASIC4Q96FT7 647 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 NDFIP2Q9NV92 336 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 UBXN8O00124 270 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 LTKP29376 864 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 AARS2Q5JTZ9 985 aaKnown RBP12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 ATG16L1Q676U5 607 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CATSPER4Q7RTX7 472 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 TADA2BQ86TJ2 420 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 AMNQ9BXJ7 453 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 ZNF263O14978 683 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 C21orf2O43822 256 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 LMNB2Q03252 620 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 DRC3Q9H069 523 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 HOMER3Q9NSC5 361 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 ZNF212Q9UDV6 495 aa12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 TCOF1Q13428 1488 aaKnown RBP12.09□□□□□ -0.47
PRPF40A-202ENST00000410080 SCG2P13521 617 aa12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 PHKA1P46020 1223 aa12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 DAB2P98082 770 aa12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 FLOT2Q14254 428 aa12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 LBRQ14739 615 aaKnown RBP12.08□□□□□ -0.47
PRPF40A-202ENST00000410080 SYDE2Q5VT97 1194 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms