RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 RAD54LQ92698 747 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 PNMA6FA0A0J9YX94 578 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 LRRC53A6NM62 1247 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 MOCS3O95396 460 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 CENPPQ6IPU0 288 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 TRAPPC11Q7Z392 1133 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 HNRNPLLQ8WVV9 542 aaKnown RBP18.35■□□□□ 0.53
PDK1-203ENST00000410055 CUL5Q93034 780 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 FGFBP2Q9BYJ0 223 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 SMARCAL1Q9NZC9 954 aa18.35■□□□□ 0.53
PDK1-203ENST00000410055 GAKO14976 1311 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 MYH1P12882 1939 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 A0A1B0GUA9 196 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 FAM170AA1A519 330 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 POTEB2H3BUK9 544 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 IRAK1P51617 712 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 C2orf54Q08AI8 447 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 USH1GQ495M9 461 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 CEP85LQ5SZL2 805 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 MSANTD4Q8NCY6 345 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 ARHGAP20Q9P2F6 1191 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 DDX20Q9UHI6 824 aaKnown RBP18.34■□□□□ 0.53
PDK1-203ENST00000410055 FNTAP49354 379 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 TUBB2AQ13885 445 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 C15orf52Q6ZUT6 534 aaKnown RBP18.34■□□□□ 0.53
PDK1-203ENST00000410055 SPDL1Q96EA4 605 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 FAM163AQ96GL9 167 aaPredicted RBP18.34■□□□□ 0.53
PDK1-203ENST00000410055 TUBB2BQ9BVA1 445 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 SBF2Q86WG5 1849 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 MAST2Q6P0Q8 1798 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 MYH10P35580 1976 aa18.34■□□□□ 0.53
PDK1-203ENST00000410055 DDX60LQ5H9U9 1706 aaKnown RBP18.33■□□□□ 0.53
PDK1-203ENST00000410055 PSMD14O00487 310 aa18.33■□□□□ 0.53
PDK1-203ENST00000410055 BUB1O43683 1085 aa18.33■□□□□ 0.53
PDK1-203ENST00000410055 MRPL12P52815 198 aaKnown RBP18.33■□□□□ 0.53
PDK1-203ENST00000410055 MEA1Q16626 185 aa18.33■□□□□ 0.53
PDK1-203ENST00000410055 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.53
PDK1-203ENST00000410055 PANK4Q9NVE7 773 aa18.33■□□□□ 0.53
PDK1-203ENST00000410055 POTEB3A0JP26 581 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 POTECB2RU33 542 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 MEIS1O00470 390 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 SHMT1P34896 483 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 HERC4Q5GLZ8 1057 aaPredicted RBP18.33■□□□□ 0.52
PDK1-203ENST00000410055 POTEBQ6S5H4 581 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 TMC4Q7Z404 712 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 CERKQ8TCT0 537 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 HAS1Q92839 578 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 SCLT1Q96NL6 688 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 KLC4Q9NSK0 619 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 EHD2Q9NZN4 543 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 STK17AQ9UEE5 414 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 PCDHA1Q9Y5I3 950 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 CAPN6Q9Y6Q1 641 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 SHTN1A0MZ66 631 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 PDE2AO00408 941 aaPredicted RBP18.33■□□□□ 0.52
PDK1-203ENST00000410055 KIAA0754O94854 1291 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 HLA-DOAP06340 250 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 SLC1A4P43007 532 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.52
PDK1-203ENST00000410055 KIF11P52732 1056 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 GFPT1Q06210 699 aaPredicted RBP18.33■□□□□ 0.52
PDK1-203ENST00000410055 TSG101Q99816 390 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 RAB21Q9UL25 225 aa18.33■□□□□ 0.52
PDK1-203ENST00000410055 GABPAQ06546 454 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 MAN2A1Q16706 1144 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 MYOCDQ8IZQ8 938 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 RETREG2Q8NC44 543 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 BMP2KQ9NSY1 1161 aaPredicted RBP18.32■□□□□ 0.52
PDK1-203ENST00000410055 PCDHA13Q9Y5I0 950 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 ESYT2A0FGR8 921 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 USO1O60763 962 aaKnown RBP18.32■□□□□ 0.52
PDK1-203ENST00000410055 COASYQ13057 564 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 ERGIC2Q96RQ1 377 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 RIC8AQ9NPQ8 531 aa18.32■□□□□ 0.52
PDK1-203ENST00000410055 ZBTB5O15062 677 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 NCK2O43639 380 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 GDF11O95390 407 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 GBP2P32456 591 aaPredicted RBP18.31■□□□□ 0.52
PDK1-203ENST00000410055 NT5C2P49902 561 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 RASSF7Q02833 373 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 RNF187Q5TA31 235 aaPredicted RBP18.31■□□□□ 0.52
PDK1-203ENST00000410055 MSL1Q68DK7 614 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
PDK1-203ENST00000410055 PRPF6O94906 941 aaKnown RBP18.31■□□□□ 0.52
PDK1-203ENST00000410055 VAV2P52735 878 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 FAM26FQ5R3K3 315 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 CCDC170Q8IYT3 715 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 GUF1Q8N442 669 aaKnown RBP18.31■□□□□ 0.52
PDK1-203ENST00000410055 EHBP1Q8NDI1 1231 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 COL24A1Q17RW2 1714 aa18.31■□□□□ 0.52
PDK1-203ENST00000410055 PVALEFA0A1B0GWK0 134 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 MAGEA1P43355 309 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 RWDD2BP57060 319 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 GPBP1Q86WP2 473 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 SPDYE1Q8NFV5 336 aaPredicted RBP18.3■□□□□ 0.52
PDK1-203ENST00000410055 COG1Q8WTW3 980 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 TEKT1Q969V4 418 aa18.3■□□□□ 0.52
PDK1-203ENST00000410055 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDK1-203ENST00000410055 COA1Q9GZY4 146 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms