RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 TAF2Q6P1X5 1199 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 RSPH3Q86UC2 560 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 RAB11FIP4Q86YS3 637 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 MICALL1Q8N3F8 863 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 APBB2Q92870 758 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 MXRA8Q9BRK3 442 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 BRPF3Q9ULD4 1205 aa16.62■□□□□ 0.25
MCF2L-210ENST00000409954 TRIP12Q14669 1992 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-210ENST00000409954 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
MCF2L-210ENST00000409954 TNFRSF10AO00220 468 aa16.61■□□□□ 0.25
MCF2L-210ENST00000409954 NAPAP54920 295 aa16.61■□□□□ 0.25
MCF2L-210ENST00000409954 GRB10Q13322 594 aa16.61■□□□□ 0.25
MCF2L-210ENST00000409954 SKIV2LQ15477 1246 aaKnown RBP16.61■□□□□ 0.25
MCF2L-210ENST00000409954 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.61■□□□□ 0.25
MCF2L-210ENST00000409954 RASEFQ8IZ41 740 aa16.61■□□□□ 0.25
MCF2L-210ENST00000409954 GLG1Q92896 1179 aa16.61■□□□□ 0.25
MCF2L-210ENST00000409954 TOP1MTQ969P6 601 aa16.61■□□□□ 0.25
MCF2L-210ENST00000409954 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 SCN5AQ14524 2016 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 TET1Q8NFU7 2136 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 LCHNA4D1U4 455 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 SMCO2A6NFE2 343 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 EPOPA6NHQ4 379 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 ARHGEF15O94989 841 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 HTRA4P83105 476 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-210ENST00000409954 FGD1P98174 961 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 FUT2Q10981 343 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-210ENST00000409954 ADCK5Q3MIX3 580 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 WWC2Q6AWC2 1192 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 MCTP2Q6DN12 878 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 TMCO2Q7Z6W1 182 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-210ENST00000409954 TRIM50Q86XT4 487 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 MYOCDQ8IZQ8 938 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 SAMD11Q96NU1 681 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 AZI2Q9H6S1 392 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 KCNH7Q9NS40 1196 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 BARHL2Q9NY43 387 aa16.6■□□□□ 0.25
MCF2L-210ENST00000409954 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 LINC01553A4QN01 128 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 LPXNO60711 386 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 BMP1P13497 986 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 ADCY7P51828 1080 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 AP3B2Q13367 1082 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 CEP55Q53EZ4 464 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 FAM117BQ6P1L5 589 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 KCNB2Q92953 911 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 SUGCTQ9HAC7 445 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 SLC9A2Q9UBY0 812 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 TELO2Q9Y4R8 837 aa16.59■□□□□ 0.25
MCF2L-210ENST00000409954 CDH23Q9H251 3354 aa16.58■□□□□ 0.25
MCF2L-210ENST00000409954 UNC80Q8N2C7 3258 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 GOLGA8AA7E2F4 631 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 GOLGA8BA8MQT2 603 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 MEIS1O00470 390 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 CTSHP09668 335 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 FAM43BQ6ZT52 329 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-210ENST00000409954 PLPPR4Q7Z2D5 763 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 ADAMTS19Q8TE59 1207 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 HLA-CQ95604 372 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 IFIH1Q9BYX4 1025 aaKnown RBP16.58■□□□□ 0.24
MCF2L-210ENST00000409954 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-210ENST00000409954 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-210ENST00000409954 NFASCO94856 1347 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.24
MCF2L-210ENST00000409954 MBLAC1A4D2B0 266 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-210ENST00000409954 CHRNA1P02708 482 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 ADD1P35611 737 aaKnown RBP16.57■□□□□ 0.24
MCF2L-210ENST00000409954 ZNF76P36508 570 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 SLC26A2P50443 739 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 GRIK4Q16099 956 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 NIPA1Q7RTP0 329 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 SP7Q8TDD2 431 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-210ENST00000409954 UHRF1Q96T88 793 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-210ENST00000409954 PKD2L1Q9P0L9 805 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 TUBE1Q9UJT0 475 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 SQORQ9Y6N5 450 aa16.57■□□□□ 0.24
MCF2L-210ENST00000409954 STXBP3O00186 592 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 ATG7O95352 703 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 ARP10275 920 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 INSRRP14616 1297 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 MARK3P27448 753 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 PSMA5P28066 241 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 CDC27P30260 824 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 HSPA4P34932 840 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 SREBF1P36956 1147 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 CLK2P49760 499 aaKnown RBP16.56■□□□□ 0.24
MCF2L-210ENST00000409954 METAP2P50579 478 aaKnown RBP eCLIP16.56■□□□□ 0.24
MCF2L-210ENST00000409954 STAT5BP51692 787 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 PFKFB3Q16875 520 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-210ENST00000409954 MARCH8Q5T0T0 291 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 IER5Q5VY09 327 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 KRT40Q6A162 431 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
MCF2L-210ENST00000409954 SKAP1Q86WV1 359 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms