RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NBPF12Q5TAG4 269 aaPredicted RBP6.09□□□□□ -1.43
LSM5-205ENST00000409952 PGM2L1Q6PCE3 622 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 C1orf228Q6PIY5 440 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 MTDHQ86UE4 582 aaKnown RBP6.09□□□□□ -1.43
LSM5-205ENST00000409952 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 UBE2FQ969M7 185 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 RC3H2Q9HBD1 1191 aaKnown RBP6.09□□□□□ -1.43
LSM5-205ENST00000409952 SPTLC3Q9NUV7 552 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 MKS1Q9NXB0 559 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 B4GALT6Q9UBX8 382 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 FHOD1Q9Y613 1164 aa6.09□□□□□ -1.43
LSM5-205ENST00000409952 CARMIL2Q6F5E8 1435 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 SLC26A4O43511 780 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 PIP5K1CO60331 668 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 ECI1P42126 302 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 SARSP49591 514 aaKnown RBP6.08□□□□□ -1.44
LSM5-205ENST00000409952 KPNA1P52294 538 aaPredicted RBP6.08□□□□□ -1.44
LSM5-205ENST00000409952 AK2P54819 239 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 ODF1Q14990 250 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 CHST15Q7LFX5 561 aaPredicted RBP6.08□□□□□ -1.44
LSM5-205ENST00000409952 TSPYL5Q86VY4 417 aaPredicted RBP6.08□□□□□ -1.44
LSM5-205ENST00000409952 ZNF354CQ86Y25 554 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 FAM186BQ8IYM0 893 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 FAM43AQ8N2R8 423 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 CLRN3Q8NCR9 226 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 CHTF18Q8WVB6 975 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 ATXN2LQ8WWM7 1075 aaKnown RBP6.08□□□□□ -1.44
LSM5-205ENST00000409952 SCLT1Q96NL6 688 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 ZFYVE21Q9BQ24 234 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 MTA3Q9BTC8 594 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 PAGR1Q9BTK6 254 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 CARS2Q9HA77 564 aaKnown RBP6.08□□□□□ -1.44
LSM5-205ENST00000409952 AS3MTQ9HBK9 375 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 JADE2Q9NQC1 790 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 PRDM7Q9NQW5 492 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 C14orf119Q9NWQ9 140 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 ZSWIM5Q9P217 1185 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 KCNH3Q9ULD8 1083 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 CTNND2Q9UQB3 1225 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 DMTF1Q9Y222 760 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 DIS3Q9Y2L1 958 aaKnown RBP6.08□□□□□ -1.44
LSM5-205ENST00000409952 PTPN22Q9Y2R2 807 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 ZNF281Q9Y2X9 895 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 PCDHA8Q9Y5H6 950 aa6.08□□□□□ -1.44
LSM5-205ENST00000409952 ABHD14A-ACY1A0A1B0GW23 586 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 CFAP69A5D8W1 941 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 TRIM75PA6NK02 468 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 WASH4PA8MWX3 477 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 ARVCFO00192 962 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 TRAF5O00463 557 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 NBNO60934 754 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 SETSIPP0DME0 302 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 ATP2A2P16615 1042 aaKnown RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 ZNF445P59923 1031 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 PRSS53Q2L4Q9 553 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 RRP12Q5JTH9 1297 aaKnown RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 IFIT1BQ5T764 474 aaKnown RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 XRRA1Q6P2D8 792 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 KCNT2Q6UVM3 1135 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 B3GNT9Q6UX72 402 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 CATIPQ7Z7H3 387 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 SRLQ86TD4 932 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 ZC3H7AQ8IWR0 971 aaKnown RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 CHST14Q8NCH0 376 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 SYTL5Q8TDW5 730 aaPredicted RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 PARD3BQ8TEW8 1205 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 SLC5A5Q92911 643 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 TRMT2BQ96GJ1 504 aaKnown RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 MYD88Q99836 296 aa6.07□□□□□ -1.44
LSM5-205ENST00000409952 TRIT1Q9H3H1 467 aaKnown RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 MORC2Q9Y6X9 1032 aaPredicted RBP6.07□□□□□ -1.44
LSM5-205ENST00000409952 EXOC5O00471 708 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 XPOTO43592 962 aaKnown RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 PCDHGA12O60330 932 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 RHCEP18577 417 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 USP14P54578 494 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 GPR85P60893 370 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 RHDQ02161 417 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 PPP2R5DQ14738 602 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 DDB1Q16531 1140 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 TMEM177Q53S58 311 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 DENND5AQ6IQ26 1287 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 RSPO2Q6UXX9 243 aaPredicted RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.06□□□□□ -1.447e-7■■■□□ 16.2
LSM5-205ENST00000409952 SLC35G2Q8TBE7 412 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 ENOX1Q8TC92 643 aaKnown RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 ASIC4Q96FT7 647 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 TAAR9Q96RI9 348 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 PLCD4Q9BRC7 762 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 CELF4Q9BZC1 486 aaKnown RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 INO80BQ9C086 356 aaPredicted RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 SLC12A5Q9H2X9 1139 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 NOL6Q9H6R4 1146 aaKnown RBP6.06□□□□□ -1.44
LSM5-205ENST00000409952 GPATCH2Q9NW75 528 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 ZNF652Q9Y2D9 606 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 IPPQ9Y573 584 aa6.06□□□□□ -1.44
LSM5-205ENST00000409952 PCDHB12Q9Y5F1 795 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms