RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 CASP8Q14790 479 aa21.92■■□□□ 1.1
LIMS2-207ENST00000409808 CALCRLQ16602 461 aa21.92■■□□□ 1.1
LIMS2-207ENST00000409808 CNNM4Q6P4Q7 775 aa21.92■■□□□ 1.1
LIMS2-207ENST00000409808 JAKMIP2Q96AA8 810 aa21.92■■□□□ 1.1
LIMS2-207ENST00000409808 TSGA10Q9BZW7 698 aa21.92■■□□□ 1.1
LIMS2-207ENST00000409808 MED4Q9NPJ6 270 aa21.92■■□□□ 1.1
LIMS2-207ENST00000409808 EMILIN3Q9NT22 766 aa21.92■■□□□ 1.1
LIMS2-207ENST00000409808 FAM71BQ8TC56 605 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 MTMR9Q96QG7 549 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 ADM5C9JUS6 153 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 PTPRAP18433 802 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 HSP90B2PQ58FF3 399 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 FKBP15Q5T1M5 1219 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 FAM160B2Q86V87 743 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 NOA1Q8NC60 698 aaKnown RBP21.91■■□□□ 1.1
LIMS2-207ENST00000409808 NEK11Q8NG66 645 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 KLRG1Q96E93 195 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 GLT8D2Q9H1C3 349 aa21.91■■□□□ 1.1
LIMS2-207ENST00000409808 CWC15Q9P013 229 aaKnown RBP21.91■■□□□ 1.1
LIMS2-207ENST00000409808 NCAPH2Q6IBW4 605 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 GOLGA5Q8TBA6 731 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 CNOT6LQ96LI5 555 aaKnown RBP21.9■■□□□ 1.1
LIMS2-207ENST00000409808 NHEJ1Q9H9Q4 299 aaPredicted RBP21.9■■□□□ 1.1
LIMS2-207ENST00000409808 PLA2G6O60733 806 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 MTIF2P46199 727 aaKnown RBP21.9■■□□□ 1.1
LIMS2-207ENST00000409808 ANKRD40Q6AI12 368 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 CALML4Q96GE6 196 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 TANGO6Q9C0B7 1094 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 PICK1Q9NRD5 415 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 GINM1Q9NU53 330 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 DDX25Q9UHL0 483 aaKnown RBP21.9■■□□□ 1.1
LIMS2-207ENST00000409808 ZHX2Q9Y6X8 837 aa21.9■■□□□ 1.1
LIMS2-207ENST00000409808 WDR46O15213 610 aaKnown RBP21.89■■□□□ 1.1
LIMS2-207ENST00000409808 FGFR1OPO95684 399 aaKnown RBP21.89■■□□□ 1.1
LIMS2-207ENST00000409808 VCAM1P19320 739 aa21.89■■□□□ 1.1
LIMS2-207ENST00000409808 ASIC1P78348 528 aa21.89■■□□□ 1.1
LIMS2-207ENST00000409808 GPR162Q16538 588 aa21.89■■□□□ 1.1
LIMS2-207ENST00000409808 IQCEQ6IPM2 695 aa21.89■■□□□ 1.1
LIMS2-207ENST00000409808 LRRC15Q8TF66 581 aa21.89■■□□□ 1.1
LIMS2-207ENST00000409808 AGBL1Q96MI9 1066 aa21.89■■□□□ 1.1
LIMS2-207ENST00000409808 PURBQ96QR8 312 aaKnown RBP21.89■■□□□ 1.1
LIMS2-207ENST00000409808 NOC4LQ9BVI4 516 aaKnown RBP21.89■■□□□ 1.1
LIMS2-207ENST00000409808 TRIM10Q9UDY6 481 aa21.89■■□□□ 1.1
LIMS2-207ENST00000409808 CFBP00751 764 aa21.89■■□□□ 1.09
LIMS2-207ENST00000409808 PPP4R3AQ6IN85 833 aa21.89■■□□□ 1.09
LIMS2-207ENST00000409808 LPAR1Q92633 364 aa21.89■■□□□ 1.09
LIMS2-207ENST00000409808 HOOK2Q96ED9 719 aa21.89■■□□□ 1.09
LIMS2-207ENST00000409808 ABCB11O95342 1321 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 HNRNPH3P31942 346 aaKnown RBP21.88■■□□□ 1.09
LIMS2-207ENST00000409808 LDHDQ86WU2 507 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 VPS18Q9P253 973 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 STK17AQ9UEE5 414 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 PPP2R3BQ9Y5P8 575 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 PVALEFA0A1B0GWK0 134 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 RASSF10A6NK89 507 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 TULP2O00295 520 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 USP2O75604 605 aaPredicted RBP21.88■■□□□ 1.09
LIMS2-207ENST00000409808 ATP1A1P05023 1023 aaKnown RBP21.88■■□□□ 1.09
LIMS2-207ENST00000409808 ZSCAN26Q16670 478 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 SUPT20HL1Q3ZLR7 823 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 HAS1Q92839 578 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 DCPSQ96C86 337 aaKnown RBP21.88■■□□□ 1.09
LIMS2-207ENST00000409808 TSPYL1Q9H0U9 437 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 RPAP3Q9H6T3 665 aaPredicted RBP21.88■■□□□ 1.09
LIMS2-207ENST00000409808 AGPAT5Q9NUQ2 364 aa21.88■■□□□ 1.09
LIMS2-207ENST00000409808 SPDYE3A6NKU9 549 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 TFRCP02786 760 aaKnown RBP21.87■■□□□ 1.09
LIMS2-207ENST00000409808 BACE1P56817 501 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 ARHGAP4P98171 946 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 KIF5AQ12840 1032 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 STK4Q13043 487 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 AP3B2Q13367 1082 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 CENPPQ6IPU0 288 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 ZNF280CQ8ND82 737 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 PHIPQ8WWQ0 1821 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 ZNF536O15090 1300 aa21.87■■□□□ 1.09
LIMS2-207ENST00000409808 A0A0U1RQG5 324 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-207ENST00000409808 POTEMA6NI47 508 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 FLOT1O75955 427 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 LMAN1P49257 510 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 VAV2P52735 878 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 HMGCS2P54868 508 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 SPA17Q15506 151 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 MIIPQ5JXC2 388 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 SV2BQ7L1I2 683 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 CPXCR1Q8N123 301 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 PRPF38AQ8NAV1 312 aaKnown RBP21.86■■□□□ 1.09
LIMS2-207ENST00000409808 PCMTD1Q96MG8 357 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-207ENST00000409808 MMTAG2Q9BU76 263 aaKnown RBP21.86■■□□□ 1.09
LIMS2-207ENST00000409808 WDR18Q9BV38 432 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 LRRC27Q9C0I9 530 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 PITPNM2Q9BZ72 1349 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 USO1O60763 962 aaKnown RBP21.86■■□□□ 1.09
LIMS2-207ENST00000409808 ACTN2P35609 894 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 AARSP49588 968 aaKnown RBP eCLIP21.86■■□□□ 1.09
LIMS2-207ENST00000409808 FOXR2Q6PJQ5 311 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 CRYGNQ8WXF5 182 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 MMS19Q96T76 1030 aa21.86■■□□□ 1.09
LIMS2-207ENST00000409808 DPY19L2Q6NUT2 758 aa21.85■■□□□ 1.09
LIMS2-207ENST00000409808 SULF1Q8IWU6 871 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms