RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 F8W031 263 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 OPA1O60313 960 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 GLI1P08151 1106 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 VPS72Q15906 364 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 CRY2Q49AN0 593 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 GLE1Q53GS7 698 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 HERC4Q5GLZ8 1057 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 KCTD1Q719H9 257 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 GPBP1Q86WP2 473 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 EHD4Q9H223 541 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 PSTPIP2Q9H939 334 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 A0A087X0T9 212 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 C6orf229H3BNL8 230 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 GNA14O95837 355 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 FAM228BP0C875 321 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 MARSP56192 900 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 SLC18A3Q16572 532 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 TTMPQ5BVD1 217 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 ALS2CLQ60I27 953 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 FAM133AQ8N9E0 248 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 RNF14Q9UBS8 474 aa16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-204ENST00000409796 LY75O60449 1722 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 ZBTB5O15062 677 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 HSF2BPO75031 334 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 CYP11B2P19099 503 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 CARSP49589 748 aaKnown RBP16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 CORO7P57737 925 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 CAPS2Q9BXY5 557 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 GANQ9H2C0 597 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 LUC7LQ9NQ29 371 aaKnown RBP16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 PACSIN2Q9UNF0 486 aaPredicted RBP16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 KLHL30Q0D2K2 578 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 MEI1Q5TIA1 1274 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 IFT20Q8IY31 132 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 ZIM3Q96PE6 472 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 GDF3Q9NR23 364 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 ADAMTS1Q9UHI8 967 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 SERPINB13Q9UIV8 391 aa16.68■□□□□ 0.26
LYSMD4-204ENST00000409796 ESYT3A0FGR9 886 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L15C9J2P7 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L13C9JLJ4 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L11C9JVI0 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L18D6R9N7 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L22D6RA61 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L17D6RBQ6 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L19D6RCP7 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L20D6RJB6 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 HEXIM1O94992 359 aaKnown RBP16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 EPB41P11171 864 aaKnown RBP16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 SHMT1P34896 483 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 STAT3P40763 770 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L24Q0WX57 530 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 ADAM9Q13443 819 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 ASIC2Q16515 512 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 KIAA0753Q2KHM9 967 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 DNAJC21Q5F1R6 531 aaKnown RBP16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 USP17L6PQ6QN14 398 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 RUFY1Q96T51 708 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 EPB41L5Q9HCM4 733 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 NFU1Q9UMS0 254 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 PCDHGC5Q9Y5F6 944 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 FAM153BP0C7A2 387 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 SLURP2P0DP57 97 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 GNGT1P63211 74 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 GUCY2DQ02846 1103 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 NNTQ13423 1086 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 FAM153CQ494X1 144 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 ZC3H3Q8IXZ2 948 aaKnown RBP16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 NGLY1Q96IV0 654 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 ZHX3Q9H4I2 956 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 AIPL1Q9NZN9 384 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 FAM153AQ9UHL3 310 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 GRIN2DO15399 1336 aa16.67■□□□□ 0.26
LYSMD4-204ENST00000409796 MED24O75448 989 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 RNASE9P60153 205 aaKnown RBP16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 KCNH2Q12809 1159 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 ARSHQ5FYA8 562 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 GPATCH4Q5T3I0 446 aaKnown RBP16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 IFT81Q8WYA0 676 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 INPP4AQ96PE3 977 aaPredicted RBP16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 KRT12Q99456 494 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 NCAPGQ9BPX3 1015 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 RABEP2Q9H5N1 569 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 GRID2IPA4D2P6 1211 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 MPHOSPH10O00566 681 aaKnown RBP16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 RIMBP2O15034 1052 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 EPS15P42566 896 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 CCT5P48643 541 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 TTC19Q6DKK2 380 aaPredicted RBP16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 GBP6Q6ZN66 633 aa16.66■□□□□ 0.26
LYSMD4-204ENST00000409796 SERPINB2P05120 415 aa16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 KRT18P05783 430 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-204ENST00000409796 ACTN1P12814 892 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms