RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 NSMFQ6X4W1 530 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 KSR1Q8IVT5 923 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
CUL1-202ENST00000409469 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 ZNF507Q8TCN5 953 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 CLEC4DQ8WXI8 215 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 NT5C3AQ9H0P0 336 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 MRPL11Q9Y3B7 192 aaKnown RBP11.03□□□□□ -0.64
CUL1-202ENST00000409469 RASSF10A6NK89 507 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 STX10O60499 249 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 ICAM1P05362 532 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 CIITAP33076 1130 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 CEP55Q53EZ4 464 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 HYIQ5T013 277 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 HAUS3Q68CZ6 603 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 MAEAQ7L5Y9 396 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 FAM160B2Q86V87 743 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 UPF1Q92900 1129 aaKnown RBP eCLIP11.03□□□□□ -0.64
CUL1-202ENST00000409469 WDR24Q96S15 920 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 ZNF577Q9BSK1 485 aa11.03□□□□□ -0.64
CUL1-202ENST00000409469 PVALEFA0A1B0GWK0 134 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 BICDL2A1A5D9 508 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 TMEM150BA6NC51 233 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 CTNND1O60716 968 aaKnown RBP11.02□□□□□ -0.64
CUL1-202ENST00000409469 RPA1P27694 616 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 TBC1D8BQ0IIM8 1120 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.64
CUL1-202ENST00000409469 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 SFR1Q86XK3 245 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 FHDC1Q9C0D6 1143 aaPredicted RBP11.02□□□□□ -0.64
CUL1-202ENST00000409469 UNC45AQ9H3U1 944 aa11.02□□□□□ -0.64
CUL1-202ENST00000409469 FAM207AQ9NSI2 230 aaPredicted RBP11.02□□□□□ -0.64
CUL1-202ENST00000409469 WDR46O15213 610 aaKnown RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 GAS7O60861 476 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 MYBP10242 640 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 MYCLP12524 364 aaPredicted RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 EEF1GP26641 437 aaKnown RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 LRRC55Q6ZSA7 311 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 MYOCDQ8IZQ8 938 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 NME8Q8N427 588 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 SCFD1Q8WVM8 642 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 TAAR1Q96RJ0 339 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 NAP1L4Q99733 375 aaKnown RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 KIAA1683Q9H0B3 1180 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 GPRC5DQ9NZD1 345 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 SYNPO2Q9UMS6 1093 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 DNM3Q9UQ16 869 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 TRAF5O00463 557 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 PSMD10O75832 226 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 PRPF6O94906 941 aaKnown RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 SLITRK3O94933 977 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 PTPRAP18433 802 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 TRIM21P19474 475 aaKnown RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 TERF1P54274 439 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 GIT2Q14161 759 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 ZNF662Q6ZS27 426 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 GUF1Q8N442 669 aaKnown RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 SMCR8Q8TEV9 937 aaPredicted RBP11.02□□□□□ -0.65
CUL1-202ENST00000409469 PPME1Q9Y570 386 aa11.02□□□□□ -0.65
CUL1-202ENST00000409469 IPO5O00410 1097 aaKnown RBP11.01□□□□□ -0.65
CUL1-202ENST00000409469 TFRCP02786 760 aaKnown RBP11.01□□□□□ -0.65
CUL1-202ENST00000409469 CYP3A4P08684 503 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 KIF18AQ8NI77 898 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 ERMNQ8TAM6 284 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 FAM20AQ96MK3 541 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 PANX2Q96RD6 677 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 SLC38A10Q9HBR0 1119 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 TRIM10Q9UDY6 481 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 POLR2AP24928 1970 aaKnown RBP11.01□□□□□ -0.65
CUL1-202ENST00000409469 GNG11P61952 73 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 MRPS9P82933 396 aaKnown RBP11.01□□□□□ -0.65
CUL1-202ENST00000409469 CNGA4Q8IV77 575 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 SCYL3Q8IZE3 742 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 CRACR2AQ9BSW2 395 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 PPP1R9AQ9ULJ8 1098 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 RABGAP1Q9Y3P9 1069 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 TELO2Q9Y4R8 837 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 RPS6KL1Q9Y6S9 549 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 ITIH6Q6UXX5 1313 aa11.01□□□□□ -0.65
CUL1-202ENST00000409469 SSC5DA1L4H1 1573 aa11□□□□□ -0.65
CUL1-202ENST00000409469 ADM5C9JUS6 153 aa11□□□□□ -0.65
CUL1-202ENST00000409469 TBX3O15119 743 aa11□□□□□ -0.65
CUL1-202ENST00000409469 PLEKP08567 350 aaPredicted RBP11□□□□□ -0.65
CUL1-202ENST00000409469 BACE1P56817 501 aa11□□□□□ -0.65
CUL1-202ENST00000409469 IRF5Q13568 498 aa11□□□□□ -0.65
CUL1-202ENST00000409469 PLS1Q14651 629 aa11□□□□□ -0.65
CUL1-202ENST00000409469 ZC2HC1CQ53FD0 456 aaPredicted RBP11□□□□□ -0.65
CUL1-202ENST00000409469 MOB2Q70IA6 237 aa11□□□□□ -0.65
CUL1-202ENST00000409469 CCDC65Q8IXS2 484 aa11□□□□□ -0.65
CUL1-202ENST00000409469 SYTL5Q8TDW5 730 aaPredicted RBP11□□□□□ -0.65
CUL1-202ENST00000409469 TRERF1Q96PN7 1200 aa11□□□□□ -0.65
CUL1-202ENST00000409469 SLC24A3Q9HC58 644 aa11□□□□□ -0.65
CUL1-202ENST00000409469 PICK1Q9NRD5 415 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms