RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 ARHGAP4P98171 946 aa21.11■□□□□ 0.97
PTPN18-203ENST00000409022 JAKMIP3Q5VZ66 844 aa21.11■□□□□ 0.97
PTPN18-203ENST00000409022 NIPA1Q7RTP0 329 aa21.11■□□□□ 0.97
PTPN18-203ENST00000409022 SLC17A8Q8NDX2 589 aa21.11■□□□□ 0.97
PTPN18-203ENST00000409022 RNPEPQ9H4A4 650 aa21.11■□□□□ 0.97
PTPN18-203ENST00000409022 SLC9A2Q9UBY0 812 aa21.11■□□□□ 0.97
PTPN18-203ENST00000409022 PCDHA11Q9Y5I1 949 aa21.11■□□□□ 0.97
PTPN18-203ENST00000409022 NFASCO94856 1347 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 FOSL2P15408 326 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 HOXC8P31273 242 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 ZNF200P98182 395 aaPredicted RBP21.1■□□□□ 0.97
PTPN18-203ENST00000409022 SSRP1Q08945 709 aaKnown RBP21.1■□□□□ 0.97
PTPN18-203ENST00000409022 TOB2Q14106 344 aaPredicted RBP21.1■□□□□ 0.97
PTPN18-203ENST00000409022 CNKSR3Q6P9H4 555 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 PGBD1Q96JS3 809 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 UPF3BQ9BZI7 483 aaKnown RBP21.1■□□□□ 0.97
PTPN18-203ENST00000409022 SH3GLB2Q9NR46 395 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 TMEM260Q9NX78 707 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 TCEAL9Q9UHQ7 104 aa21.1■□□□□ 0.97
PTPN18-203ENST00000409022 RSPH10B2B2RC85 870 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 MEIS1O00470 390 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 CDKL5O76039 1030 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 CXCL10P02778 98 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 RSPH10BP0C881 870 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 PBX2P40425 430 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 SETQ01105 290 aaPredicted RBP21.09■□□□□ 0.97
PTPN18-203ENST00000409022 NTRK3Q16288 839 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 PKN1Q16512 942 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 TRIM71Q2Q1W2 868 aaKnown RBP21.09■□□□□ 0.97
PTPN18-203ENST00000409022 ZNF618Q5T7W0 954 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 TRIM50Q86XT4 487 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 FAM177A1Q8N128 213 aaPredicted RBP21.09■□□□□ 0.97
PTPN18-203ENST00000409022 VWCEQ96DN2 955 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 GAS2L1Q99501 681 aaPredicted RBP21.09■□□□□ 0.97
PTPN18-203ENST00000409022 SETD4Q9NVD3 440 aa21.09■□□□□ 0.97
PTPN18-203ENST00000409022 LAMA2P24043 3122 aaKnown RBP21.09■□□□□ 0.97
PTPN18-203ENST00000409022 ABHD14A-ACY1A0A1B0GW23 586 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 RPLP2P05387 115 aaKnown RBP21.08■□□□□ 0.97
PTPN18-203ENST00000409022 PPFIA1Q13136 1202 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 IKBKEQ14164 716 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 ANKRD1Q15327 319 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 TAF2Q6P1X5 1199 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 RSPH3Q86UC2 560 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 MYLIPQ8WY64 445 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 C22orf23Q9BZE7 217 aa21.08■□□□□ 0.97
PTPN18-203ENST00000409022 NCOA5Q9HCD5 579 aaKnown RBP21.08■□□□□ 0.97
PTPN18-203ENST00000409022 AGO4Q9HCK5 861 aaKnown RBP21.08■□□□□ 0.97
PTPN18-203ENST00000409022 GSTTP1A0A1W2PQM5 241 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 TREHO43280 583 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 DEXIO95424 95 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 CYP3A4P08684 503 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 NLRP5P59047 1200 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 GRIN2CQ14957 1233 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 PPP2R2DQ66LE6 453 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 PLA2G4DQ86XP0 818 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 NKX2-4Q9H2Z4 354 aa21.07■□□□□ 0.96
PTPN18-203ENST00000409022 RRN3P2A6NIE6 340 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 NBNO60934 754 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 LGR5O75473 907 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 ARP10275 920 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 SLC26A2P50443 739 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 CYP2W1Q8TAV3 490 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 LMBR1Q8WVP7 490 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 MYH7BA7E2Y1 1941 aa21.06■□□□□ 0.96
PTPN18-203ENST00000409022 MARK3P27448 753 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 RABGGTBP53611 331 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 ACTR2P61160 394 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 HIC1Q14526 733 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 GALNT17Q6IS24 598 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 PLPPR4Q7Z2D5 763 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 HERC6Q8IVU3 1022 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 MAFAQ8NHW3 353 aaPredicted RBP21.05■□□□□ 0.96
PTPN18-203ENST00000409022 WNT8BQ93098 351 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 SLKQ9H2G2 1235 aaPredicted RBP21.05■□□□□ 0.96
PTPN18-203ENST00000409022 TBC1D22BQ9NU19 505 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 VPS54Q9P1Q0 977 aa21.05■□□□□ 0.96
PTPN18-203ENST00000409022 XBP1P17861 261 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 STAT5BP51692 787 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 STK3Q13188 491 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 GRIK4Q16099 956 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 FAM160B1Q5W0V3 765 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 SEPT8Q92599 483 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 ZNF577Q9BSK1 485 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 ZBED2Q9BTP6 218 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 TUBE1Q9UJT0 475 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 TRPC6Q9Y210 931 aa21.04■□□□□ 0.96
PTPN18-203ENST00000409022 YBX2Q9Y2T7 364 aaKnown RBP21.04■□□□□ 0.96
PTPN18-203ENST00000409022 TANC1Q9C0D5 1861 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 FAM86B1E9PN63 330 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 IPO5O00410 1097 aaKnown RBP21.03■□□□□ 0.96
PTPN18-203ENST00000409022 BACH1O14867 736 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 PPFIA3O75145 1194 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 FAM86B2P0C5J1 330 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 WDR5P61964 334 aaKnown RBP21.03■□□□□ 0.96
PTPN18-203ENST00000409022 ADAM17P78536 824 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 ITGB3BPQ13352 177 aaPredicted RBP21.03■□□□□ 0.96
PTPN18-203ENST00000409022 GPNMBQ14956 572 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 MIS18BP1Q6P0N0 1132 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 TRAF7Q6Q0C0 670 aa21.03■□□□□ 0.96
PTPN18-203ENST00000409022 RPAINQ86UA6 219 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms