RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 FTHL17Q9BXU8 183 aa14.66□□□□□ -0.06
SNORD88B-201ENST00000408454 RNPEPQ9H4A4 650 aa14.66□□□□□ -0.06
SNORD88B-201ENST00000408454 TBC1D22BQ9NU19 505 aa14.66□□□□□ -0.06
SNORD88B-201ENST00000408454 TUBE1Q9UJT0 475 aa14.66□□□□□ -0.06
SNORD88B-201ENST00000408454 CNTNAP5Q8WYK1 1306 aa14.66□□□□□ -0.06
SNORD88B-201ENST00000408454 CPLX1O14810 134 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 CDKL5O76039 1030 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 SCG2P13521 617 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 RXRAP19793 462 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 HSPA4P34932 840 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 SP2Q02086 613 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 SP4Q02446 784 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 PLPPR4Q7Z2D5 763 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 NME8Q8N427 588 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 JAKMIP1Q96N16 626 aaKnown RBP14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 RNF26Q9BY78 433 aaPredicted RBP14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 CEP131Q9UPN4 1083 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 TRPC6Q9Y210 931 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 TAF6LQ9Y6J9 622 aa14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 V9GY48 417 aaPredicted RBP14.65□□□□□ -0.06
SNORD88B-201ENST00000408454 KCNA2P16389 499 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 SREBF1P36956 1147 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 RABGGTBP53611 331 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 PFKFB3Q16875 520 aaPredicted RBP14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 PLEKHG4Q58EX7 1191 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 WWC2Q6AWC2 1192 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 SMAP1Q8IYB5 467 aaPredicted RBP14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 PPP2R3CQ969Q6 453 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 YME1L1Q96TA2 773 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 LRRC2Q9BYS8 371 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 ANO3Q9BYT9 981 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 IFIH1Q9BYX4 1025 aaKnown RBP14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 KCNH7Q9NS40 1196 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 FAM50BQ9Y247 325 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 YBX2Q9Y2T7 364 aaKnown RBP14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 CYP46A1Q9Y6A2 500 aa14.64□□□□□ -0.07
SNORD88B-201ENST00000408454 COL1A2P08123 1366 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 NID2Q14112 1375 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 NBNO60934 754 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 SLC35G1Q2M3R5 365 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 TRIM71Q2Q1W2 868 aaKnown RBP14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 FAM26DQ5JW98 314 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 GALNT17Q6IS24 598 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 MIS18BP1Q6P0N0 1132 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 MYOCDQ8IZQ8 938 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 LMBR1Q8WVP7 490 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 ARNTL2Q8WYA1 636 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 DHX38Q92620 1227 aaKnown RBP14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 GPKOWQ92917 476 aaPredicted RBP eCLIP14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 FAM167AQ96KS9 214 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 SETD4Q9NVD3 440 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 LAMA3Q16787 3333 aa14.63□□□□□ -0.07
SNORD88B-201ENST00000408454 DNAH12Q6ZR08 3092 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 BACH1O14867 736 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 TREHO43280 583 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 PRPF3O43395 683 aaKnown RBP14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 NCK2O43639 380 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 SORBS3O60504 671 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 STAG3L1P0CL83 205 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 ITGB5P18084 799 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 RPS6KB1P23443 525 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 STAT5BP51692 787 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 KRT76Q01546 638 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 TAP1Q03518 808 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 ANKRD1Q15327 319 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 GRIK4Q16099 956 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 UBE2SQ16763 222 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 Q6ZUG5 572 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 CMTR1Q8N1G2 835 aaKnown RBP14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 DBF4BQ8NFT6 615 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 PPM1EQ8WY54 764 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 KCNB2Q92953 911 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 BRF1Q92994 677 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 ASB2Q96Q27 587 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 NAP1L4Q99733 375 aaKnown RBP14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 ZMYND12Q9H0C1 365 aa14.62□□□□□ -0.07
SNORD88B-201ENST00000408454 FSD2A1L4K1 749 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 STXBP3O00186 592 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 HBP1O60381 514 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 CYP3A4P08684 503 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 ERVK-21P61565 698 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 TIGD5Q53EQ6 642 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 TSHZ1Q6ZSZ6 1077 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 MICALL1Q8N3F8 863 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 CTAGE1Q96RT6 745 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 COL25A1Q9BXS0 654 aaPredicted RBP14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 TM6SF1Q9BZW5 370 aa14.61□□□□□ -0.07
SNORD88B-201ENST00000408454 POTEB3A0JP26 581 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 MBLAC1A4D2B0 266 aaPredicted RBP14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 CARNS1A5YM72 827 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 IPO5O00410 1097 aaKnown RBP14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 MEIS1O00470 390 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 DKC1O60832 514 aaKnown RBP eCLIP14.6□□□□□ -0.072e-11■■■■□ 26.2
SNORD88B-201ENST00000408454 RB1P06400 928 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 PSAPP07602 524 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 CTSHP09668 335 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 IFNAR1P17181 557 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 TMOD1P28289 359 aa14.6□□□□□ -0.07
SNORD88B-201ENST00000408454 ACTR2P61160 394 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms