RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ZSCAN12O43309 604 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 TPM1P09493 284 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 CYBAP13498 195 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 DNAJB2P25686 324 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 STAT2P52630 851 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 GRB14Q14449 540 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 CCDC85BQ15834 202 aaPredicted RBP14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 TTBK2Q6IQ55 1244 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 CCAR2Q8N163 923 aaKnown RBP14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 PRPF38AQ8NAV1 312 aaKnown RBP14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 KIF18AQ8NI77 898 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 ADAMTS19Q8TE59 1207 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 KIFC2Q96AC6 838 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 GAS2L1Q99501 681 aaPredicted RBP14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 SLF1Q9BQI6 1058 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 ZMYND12Q9H0C1 365 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 GLT8D2Q9H1C3 349 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 ZNF576Q9H609 170 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 FANCLQ9NW38 375 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 NFE2L3Q9Y4A8 694 aa14.45□□□□□ -0.1
SMARCB1-203ENST00000407082 A0A087WWV3 80 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 hCG_1642624A0A1W2PR95 340 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 PLA2G6O60733 806 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 PQBP1O60828 265 aaKnown RBP14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 HOXC6P09630 235 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 ITGB8P26012 769 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 DSG3P32926 999 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 MCM7P33993 719 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 SLC16A2P36021 539 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 NAPAP54920 295 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 GRIN1Q05586 938 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 DPYDQ12882 1025 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 STIM1Q13586 685 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 NONOQ15233 471 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 LRRC41Q15345 812 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 PPP1R18Q6NYC8 613 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 HEATR3Q7Z4Q2 680 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 FAM160B2Q86V87 743 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 C17orf53Q8N3J3 647 aaPredicted RBP14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 STAG2Q8N3U4 1231 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 NAP1L4Q99733 375 aaKnown RBP14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 CCSER1Q9C0I3 900 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 PPP1R9AQ9ULJ8 1098 aa14.44□□□□□ -0.1
SMARCB1-203ENST00000407082 SPDYE16A6NNV3 312 aaPredicted RBP14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 STXBP3O00186 592 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 SEPT4O43236 478 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 CLTBP09497 229 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 ADORA2AP29274 412 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 UBA7P41226 1012 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 AMPD3Q01432 767 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 FPGSQ05932 587 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 GLIPR1L2Q4G1C9 344 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 BTNL9Q6UXG8 535 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 ATXN2LQ8WWM7 1075 aaKnown RBP14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 TIFAQ96CG3 184 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 ATG4CQ96DT6 458 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 EPSTI1Q96J88 318 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 C16orf45Q96MC5 204 aaPredicted RBP14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 ASB2Q96Q27 587 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 UHRF1Q96T88 793 aaPredicted RBP14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 UBA5Q9GZZ9 404 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 TMEM39AQ9NV64 488 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 PCDHA6Q9UN73 950 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 PCDHA8Q9Y5H6 950 aa14.43□□□□□ -0.1
SMARCB1-203ENST00000407082 M0R2N6 131 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 VWA5AO00534 786 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 ARHGAP6O43182 974 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 ZBED4O75132 1171 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 ZNF18P17022 549 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 IGFBP4P22692 258 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 STAT6P42226 847 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 AFMP43652 599 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 PLS1Q14651 629 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 SNX17Q15036 470 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 EARS2Q5JPH6 523 aaKnown RBP14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 SYDE2Q5VT97 1194 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 RRAGBQ5VZM2 374 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 SPECC1LQ69YQ0 1117 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 WWC2Q6AWC2 1192 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 MCTP2Q6DN12 878 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 LBX2Q6XYB7 198 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 MB21D1Q8N884 522 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 RASSF8Q8NHQ8 419 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 NAA15Q9BXJ9 866 aaKnown RBP14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 RAB34Q9BZG1 259 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 LRRC27Q9C0I9 530 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 CPVLQ9H3G5 476 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 PRDM12Q9H4Q4 367 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 THEGQ9P2T0 379 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 PRR12Q9ULL5 1215 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 ADAMTS5Q9UNA0 930 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 CTDP1Q9Y5B0 961 aaPredicted RBP14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 RLFQ13129 1914 aa14.42□□□□□ -0.1
SMARCB1-203ENST00000407082 SYNRGQ9UMZ2 1314 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 SMCO2A6NFE2 343 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 RIOK3O14730 519 aaKnown RBP14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 STX10O60499 249 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
SMARCB1-203ENST00000407082 MRPS5P82675 430 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms