RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 XRRA1Q6P2D8 792 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 NBPF11Q86T75 865 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 RBM46Q8TBY0 533 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 RMDN3Q96TC7 470 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TRIM9Q9C026 710 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 NSRP1Q9H0G5 558 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 RAB17Q9H0T7 212 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 RNF146Q9NTX7 359 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TYW1Q9NV66 732 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 SEPT9Q9UHD8 586 aaPredicted RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 MAD2L2Q9UI95 211 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 LRRIQ4A6NIV6 560 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 M0QZ92 97 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 MEIS1O00470 390 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 HNRNPDLO14979 420 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 PRPF6O94906 941 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 ATP2A2P16615 1042 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 POLR2BP30876 1174 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 GBP1P32455 592 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 PLCB3Q01970 1234 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 MTMR1Q13613 665 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 UTP14CQ5TAP6 766 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 RUFY4Q6ZNE9 571 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 C3orf67Q6ZVT6 689 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 INTS8Q75QN2 995 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 LDHDQ86WU2 507 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 CCDC125Q86Z20 511 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 RUNDC3BQ96NL0 473 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 WRNIP1Q96S55 665 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TRIM6Q9C030 488 aaPredicted RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 KCND2Q9NZV8 630 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 HPSEQ9Y251 543 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 SETD1AO15047 1707 aaKnown RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 ZBTB7AO95365 584 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 ATP5DP30049 168 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TGFB2P61812 414 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 PTK2Q05397 1052 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 GABPB1Q06547 395 aaPredicted RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 STXBP2Q15833 593 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TBC1D10BQ4KMP7 808 aaPredicted RBP5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 CEP55Q53EZ4 464 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 TTBK2Q6IQ55 1244 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 DCUN1D2Q6PH85 259 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 ADSSL1Q8N142 457 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 JMJD4Q9H9V9 463 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 CEP72Q9P209 647 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 SYNPO2Q9UMS6 1093 aa5.18□□□□□ -1.58
PCDH11X-207ENST00000406881 ITIH6Q6UXX5 1313 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 DLG5Q8TDM6 1919 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ERICH4A6NGS2 130 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 LDHAP00338 332 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 CD19P15391 556 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 HSPA6P17066 643 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 RFX1P22670 979 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 GJC1P36383 396 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 QARSP47897 775 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 SPP2Q13103 211 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 CTTNQ14247 550 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 RASA3Q14644 834 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 KNOP1Q1ED39 458 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ZNF365Q70YC5 407 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 TXNRD3Q86VQ6 643 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 SLC35F6Q8N357 371 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 FAM76AQ8TAV0 307 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 IPO4Q8TEX9 1081 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 TCP11Q8WWU5 503 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 TRERF1Q96PN7 1200 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 MAK16Q9BXY0 300 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ACAD9Q9H845 621 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 PRR12Q9ULL5 1215 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 JRKLQ9Y4A0 524 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ZHX2Q9Y6X8 837 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 A0A1B0GTH6 734 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 E9PMD0 336 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 XPOTO43592 962 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 GAS8O95995 478 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 TMEM191BP0C7N4 346 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ATF7P17544 494 aaPredicted RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ERCC3P19447 782 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 MXI1P50539 228 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 PSMC5P62195 406 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ST3GAL1Q11201 340 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 NEDD9Q14511 834 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 PDXDC2PQ6P474 469 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 PADI6Q6TGC4 694 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 SFR1Q86XK3 245 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 PPM1KQ8N3J5 372 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 CCDC127Q96BQ5 260 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 GMCL1Q96IK5 515 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 NHEJ1Q9H9Q4 299 aaPredicted RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 RAVER2Q9HCJ3 691 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 MAP3K20Q9NYL2 800 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 ODF2LQ9ULJ1 636 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 POTEB3A0JP26 581 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 FAM205CA6NFA0 338 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 POTECB2RU33 542 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 IPO5O00410 1097 aaKnown RBP5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 PDXKO00764 312 aa5.17□□□□□ -1.58
PCDH11X-207ENST00000406881 CTNND1O60716 968 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms