RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PTRH1Q86Y79 214 aaKnown RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 OXR1Q8N573 874 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 UHMK1Q8TAS1 419 aaKnown RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 PHOSPHO1Q8TCT1 267 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 LINC01599Q8WXQ3 324 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 HHIPL1Q96JK4 782 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 ALPK1Q96QP1 1244 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 PCMTD2Q9NV79 361 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 USP36Q9P275 1121 aaKnown RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 PNMA8BQ9ULN7 279 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 ANKRD6Q9Y2G4 727 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 ATP23Q9Y6H3 246 aa6.21□□□□□ -1.42
HMGB3P18-201ENST00000406327 MYL1P05976 194 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 SLC6A11P48066 632 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 KIF11P52732 1056 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 LRRC32Q14392 662 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 MLC1Q15049 377 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 LRRC41Q15345 812 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 INAVAQ3KP66 663 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 EMC4Q5J8M3 183 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 CC2D1AQ6P1N0 951 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 INTS5Q6P9B9 1019 aaKnown RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 CEP128Q6ZU80 1094 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 DCP2Q8IU60 420 aaKnown RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 NOSTRINQ8IVI9 506 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 TRIM48Q8IWZ4 208 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 CBARPQ8N350 705 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 MAGEB6Q8N7X4 407 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 PIP4K2CQ8TBX8 421 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 JPH3Q8WXH2 748 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 SSH1Q8WYL5 1049 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 ASIC4Q96FT7 647 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 ACAP3Q96P50 834 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 JMJD8Q96S16 334 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 G6PC3Q9BUM1 346 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 RTFDC1Q9BY42 306 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 CARS2Q9HA77 564 aaKnown RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 PDLIM7Q9NR12 457 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 KCNH7Q9NS40 1196 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 BSDC1Q9NW68 430 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 SLC52A1Q9NWF4 448 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 C14orf119Q9NWQ9 140 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 MKS1Q9NXB0 559 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 H2AFY2Q9P0M6 372 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 TMEM59LQ9UK28 342 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 RWDD3Q9Y3V2 267 aa6.2□□□□□ -1.42
HMGB3P18-201ENST00000406327 PLEKHD1A6NEE1 506 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 PRR19A6NJB7 356 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 TRIM75PA6NK02 468 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 MAN2B1O00754 1011 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 TGM5O43548 720 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 MAP4K4O95819 1239 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 MT-CO1P00395 513 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 AMY2AP04746 511 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 ZBTB48P10074 688 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 RBP3P10745 1247 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 AMY2BP19961 511 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 IARSP41252 1262 aaKnown RBP6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 FNTBP49356 437 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 IRAK1P51617 712 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 SMAD3P84022 425 aaKnown RBP6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 FZD5Q13467 585 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 SMAD2Q15796 467 aaKnown RBP6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 PGM2L1Q6PCE3 622 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 FRMD7Q6ZUT3 714 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 C1orf162Q8NEQ5 155 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 PLEKHO2Q8TD55 490 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 NUP88Q99567 741 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 MTA3Q9BTC8 594 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 RHOBTB2Q9BYZ6 727 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 ZDHHC5Q9C0B5 715 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 AP5M1Q9H0R1 490 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 SMOC1Q9H4F8 434 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 SLAMF8Q9P0V8 285 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 IP6K2Q9UHH9 426 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 KCNG1Q9UIX4 513 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 B3GALT1Q9Y5Z6 326 aa6.19□□□□□ -1.42
HMGB3P18-201ENST00000406327 FITM1A5D6W6 292 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 HGSO14964 777 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 USP2O75604 605 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 ZGLP1P0C6A0 271 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 COL6A2P12110 1019 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 SLC9A1P19634 815 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 ADCY1Q08828 1119 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 HSF5Q4G112 596 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 STEAP3Q658P3 488 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 KCTD1Q719H9 257 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 NETO2Q8NC67 525 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 PDZD8Q8NEN9 1154 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 TTC8Q8TAM2 541 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 E2F7Q96AV8 911 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 FAXDC2Q96IV6 333 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 ELF4Q99607 663 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 MYH16Q9H6N6 1097 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 SP110Q9HB58 689 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 IMPACTQ9P2X3 320 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 NUDT5Q9UKK9 219 aa6.18□□□□□ -1.42
HMGB3P18-201ENST00000406327 SLC5A6Q9Y289 635 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 1108.2 ms