RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 AFG3L2Q9Y4W6 797 aa13.14□□□□□ -0.31
SMS-202ENST00000404933 WDR90Q96KV7 1748 aa13.14□□□□□ -0.31
SMS-202ENST00000404933 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 LGALS16A8MUM7 142 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 IPO5O00410 1097 aaKnown RBP13.13□□□□□ -0.31
SMS-202ENST00000404933 ARHGAP6O43182 974 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 ADKP55263 362 aaKnown RBP13.13□□□□□ -0.31
SMS-202ENST00000404933 PSMC6P62333 389 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
SMS-202ENST00000404933 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 CYP4A11Q02928 519 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 UBXN1Q04323 297 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 PABPC4Q13310 644 aaKnown RBP eCLIP13.13□□□□□ -0.311e-28■□□□□ 9.8
SMS-202ENST00000404933 ARSHQ5FYA8 562 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 HERC4Q5GLZ8 1057 aaPredicted RBP13.13□□□□□ -0.31
SMS-202ENST00000404933 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 CATSPERGQ6ZRH7 1159 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
SMS-202ENST00000404933 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 CHMP2AO43633 222 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 ITGB5P18084 799 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 RBL2Q08999 1139 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 GOLGA8FQ08AF8 430 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 GOLGA8DPQ0D2H9 430 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 PRKG1Q13976 671 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 EPHA7Q15375 998 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 SH3D19Q5HYK7 790 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 C9orf131Q5VYM1 1079 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 E4F1Q66K89 784 aaPredicted RBP13.13□□□□□ -0.31
SMS-202ENST00000404933 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 CNGA4Q8IV77 575 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 KRT222Q8N1A0 295 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
SMS-202ENST00000404933 TUBGCP2Q9BSJ2 902 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 RNF146Q9NTX7 359 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 RGL1Q9NZL6 768 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 UBIAD1Q9Y5Z9 338 aa13.13□□□□□ -0.31
SMS-202ENST00000404933 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 A0A1W2PQC6 194 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
SMS-202ENST00000404933 SLITRK3O94933 977 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 YBX3P16989 372 aaKnown RBP eCLIP13.12□□□□□ -0.313e-8■■■□□ 15.8
SMS-202ENST00000404933 MTIF2P46199 727 aaKnown RBP13.12□□□□□ -0.31
SMS-202ENST00000404933 DNM2P50570 870 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 GIT2Q14161 759 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 TKFCQ3LXA3 575 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 B3GNT9Q6UX72 402 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 SLC30A10Q6XR72 485 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 TPH2Q8IWU9 490 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 IL31RAQ8NI17 732 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 NEK9Q8TD19 979 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
SMS-202ENST00000404933 TAAR1Q96RJ0 339 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 NAA15Q9BXJ9 866 aaKnown RBP13.12□□□□□ -0.31
SMS-202ENST00000404933 MAF1Q9H063 256 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 BHMT2Q9H2M3 363 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 UNC45AQ9H3U1 944 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 JADE2Q9NQC1 790 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 KCNH7Q9NS40 1196 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 TRMT1Q9NXH9 659 aaKnown RBP13.12□□□□□ -0.31
SMS-202ENST00000404933 HOXC10Q9NYD6 342 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 PCDHA2Q9Y5H9 948 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 CSADQ9Y600 493 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
SMS-202ENST00000404933 PES1O00541 588 aaKnown RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 MFAP3LO75121 409 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 SLU7O95391 586 aaKnown RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 VGLL4Q14135 290 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 CTTNQ14247 550 aaKnown RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 PGM5Q15124 567 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 LRRC41Q15345 812 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 XRRA1Q6P2D8 792 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 ZNF507Q8TCN5 953 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 NACC1Q96RE7 527 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 RMDN3Q96TC7 470 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 ARID3AQ99856 593 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 SNCAIPQ9Y6H5 919 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 OTOFQ9HC10 1997 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 PTPRFP10586 1907 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 GYPCP04921 128 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 EIF2AK2P19525 551 aaKnown RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 IREB2P48200 963 aaKnown RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 MRPS9P82933 396 aaKnown RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
SMS-202ENST00000404933 RAD51AP2Q09MP3 1159 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 MTMR1Q13613 665 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
SMS-202ENST00000404933 GLIS3Q8NEA6 775 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms