RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 SERPING1P05155 500 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 KCNA1Q09470 495 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 TCP10Q12799 353 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 CEP85LQ5SZL2 805 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 TADA2BQ86TJ2 420 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 DDX47Q9H0S4 455 aaKnown RBP13.17□□□□□ -0.3
RBM39-206ENST00000403542 RIOX1Q9H6W3 641 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 EMILIN3Q9NT22 766 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 DLEC1Q9Y238 1755 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
RBM39-206ENST00000403542 GRID2IPA4D2P6 1211 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 GOLGA8KD6RF30 607 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 ASIC2Q16515 512 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 USH1GQ495M9 461 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 EMBQ6PCB8 327 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 PPANQ9NQ55 473 aaKnown RBP13.16□□□□□ -0.3
RBM39-206ENST00000403542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.16□□□□□ -0.31e-6■■■■■ 29.9
RBM39-206ENST00000403542 CEP72Q9P209 647 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 MED24O75448 989 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 ERLIN2O94905 339 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 COPB2P35606 906 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 PRR16Q569H4 304 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
RBM39-206ENST00000403542 SHOX2O60902 331 aaPredicted RBP13.15□□□□□ -0.3
RBM39-206ENST00000403542 LCA5LO95447 670 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 PPP1R2P41236 205 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 SLC18A3Q16572 532 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 RNF187Q5TA31 235 aaPredicted RBP13.15□□□□□ -0.3
RBM39-206ENST00000403542 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.3
RBM39-206ENST00000403542 KSR1Q8IVT5 923 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 TAF4BQ92750 862 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 ITGA4P13612 1032 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 CASP4P49662 377 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
RBM39-206ENST00000403542 NAB2Q15742 525 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 ZCWPW2Q504Y3 356 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 TRMT1LQ7Z2T5 733 aaKnown RBP13.15□□□□□ -0.3
RBM39-206ENST00000403542 CUL5Q93034 780 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 SH3GL2Q99962 352 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 GGA1Q9UJY5 639 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 PCDHB13Q9Y5F0 798 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 PCDHAC2Q9Y5I4 1007 aa13.15□□□□□ -0.3
RBM39-206ENST00000403542 MYBP10242 640 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PRLRP16471 622 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 FLT3P36888 993 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PRPF4BQ13523 1007 aaKnown RBP13.14□□□□□ -0.31
RBM39-206ENST00000403542 TMEM119Q4V9L6 283 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 CELF4Q9BZC1 486 aaKnown RBP13.14□□□□□ -0.31
RBM39-206ENST00000403542 RIC8AQ9NPQ8 531 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
RBM39-206ENST00000403542 HDAC9Q9UKV0 1011 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 MYH1P12882 1939 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PJA2O43164 708 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 ATP2C2O75185 946 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 GTF2A1P52655 376 aaPredicted RBP13.14□□□□□ -0.31
RBM39-206ENST00000403542 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PAK2Q13177 524 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 TRIM59Q8IWR1 403 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 ZFPM1Q8IX07 1006 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 CCDC65Q8IXS2 484 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 EFCAB13Q8IY85 973 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 DPH5Q9H2P9 285 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 LAMB1P07942 1786 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 SSU72P8A0A1W2PR75 194 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 H0YHG0 523 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 MYO1FO00160 1098 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 CYP11B2P19099 503 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 NR1D1P20393 614 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 ABCB4P21439 1286 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 INPP5BP32019 993 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PDIA5Q14554 519 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 ARSHQ5FYA8 562 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 MEI1Q5TIA1 1274 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 DHX37Q8IY37 1157 aaKnown RBP13.14□□□□□ -0.31
RBM39-206ENST00000403542 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 LRRC4CQ9HCJ2 640 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
RBM39-206ENST00000403542 AMACRQ9UHK6 382 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 CAPN7Q9Y6W3 813 aa13.14□□□□□ -0.31
RBM39-206ENST00000403542 PNMA6FA0A0J9YX94 578 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 E7EVH7 732 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 TMOD1P28289 359 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 HOXA13P31271 388 aaPredicted RBP13.13□□□□□ -0.31
RBM39-206ENST00000403542 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
RBM39-206ENST00000403542 NFIAQ12857 509 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms