RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 PCIF1Q9H4Z3 704 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 TNFRSF12AQ9NP84 129 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 RIC8BQ9NVN3 520 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 C14orf119Q9NWQ9 140 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 PCDHB4Q9Y5E5 795 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 ATP23Q9Y6H3 246 aa5.28□□□□□ -1.56
HMGB1P17-201ENST00000403495 PRAMEF25A6NGN4 478 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 RASSF10A6NK89 507 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 F8W031 263 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 KRIT1O00522 736 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 HGSO14964 777 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 TADA3O75528 432 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 MYBL2P10244 700 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 NEK2P51955 445 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 SCAND1P57086 179 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 MCL1Q07820 350 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 NR0B2Q15466 257 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZNF174Q15697 407 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 FIGNQ5HY92 759 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZMYM1Q5SVZ6 1142 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 ADGRF1Q5T601 910 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 SYDE2Q5VT97 1194 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 BTBD8Q5XKL5 378 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 MILR1Q7Z6M3 343 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 CABP7Q86V35 215 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 CBARPQ8N350 705 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 EFHBQ8N7U6 833 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 ABHD4Q8TB40 342 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 PANK1Q8TE04 598 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 ERCC4Q92889 916 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 AHCYL2Q96HN2 611 aaKnown RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 PUS7LQ9H0K6 701 aaKnown RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZMAT4Q9H898 229 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 AASDHPPTQ9NRN7 309 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 TOPORSQ9NS56 1045 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 ASH2LQ9UBL3 628 aa5.27□□□□□ -1.57
HMGB1P17-201ENST00000403495 TCRBV5S2A0A599 114 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 SHTN1A0MZ66 631 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 ACOT7O00154 380 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 BUB1BO60566 1050 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 ADAM23O75077 832 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 HIP1RO75146 1068 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 RAC2P15153 192 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 PNLIPP16233 465 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 PTPN1P18031 435 aaKnown RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 RAB27AP51159 221 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 ERVK-21P61565 698 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 SMAD3P84022 425 aaKnown RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 OCRLQ01968 901 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 RAB3GAP1Q15042 981 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 TERF2Q15554 542 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 SMAD2Q15796 467 aaKnown RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 PTPN21Q16825 1174 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 EMC4Q5J8M3 183 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 DCP2Q8IU60 420 aaKnown RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 RTF1Q92541 710 aaKnown RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 DLG3Q92796 817 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 HOOK2Q96ED9 719 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 SEMA4AQ9H3S1 761 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 SMOC1Q9H4F8 434 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 RBPJLQ9UBG7 517 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 DBR1Q9UK59 544 aaKnown RBP5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 SPO11Q9Y5K1 396 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 B3GALT1Q9Y5Z6 326 aa5.26□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 HYAL3O43820 417 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 CLASP2O75122 1294 aaKnown RBP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 H2AFYO75367 372 aaKnown RBP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 ULK1O75385 1050 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 C4BPAP04003 597 aaKnown RBP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 MMEP08473 750 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 ARL4AP40617 200 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 SLC6A11P48066 632 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 PRR5P85299 388 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 PDCD1Q15116 288 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 PCBP2Q15366 365 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 CATSPEREQ5SY80 951 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 RPTNQ6XPR3 784 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 NOL8Q76FK4 1167 aaKnown RBP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 ZBTB46Q86UZ6 589 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 KRTAP1-3Q8IUG1 177 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 WDR75Q8IWA0 830 aaKnown RBP5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 LILRA2Q8N149 483 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 NETO2Q8NC67 525 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 AGBL5Q8NDL9 886 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 TGFBRAP1Q8WUH2 860 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 SEC14L1Q92503 715 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 CCDC120Q96HB5 630 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 AP5M1Q9H0R1 490 aa5.25□□□□□ -1.57
HMGB1P17-201ENST00000403495 SCO2A0A1W2PP80 73 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 AKAP10O43572 662 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 KDM1AO60341 852 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 SCGB1D2O95969 90 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 CYBBP04839 570 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 CLEC2LP0C7M8 214 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 MC4RP32245 332 aa5.24□□□□□ -1.57
HMGB1P17-201ENST00000403495 THBS2P35442 1172 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms