RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 DEFB118Q96PH6 123 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 IDI2Q9BXS1 227 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 PRO3102Q9H379 93 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 COPRSQ9NQ92 184 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 KBTBD4Q9NVX7 518 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 MKI67P46013 3256 aaKnown RBP8.32□□□□□ -1.08
CEACAM1-208ENST00000403461 SALL1Q9NSC2 1324 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 TRIM75PA6NK02 468 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 ANP32CO43423 234 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 CTNND1O60716 968 aaKnown RBP8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 SLFN14P0C7P3 912 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 TFE3P19532 575 aaPredicted RBP8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 RGS3P49796 1198 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 NKAPLQ5M9Q1 402 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 SPTY2D1Q68D10 685 aaPredicted RBP8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 C12orf50Q8NA57 414 aaPredicted RBP8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 GPBAR1Q8TDU6 330 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 WDR18Q9BV38 432 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 GABRQQ9UN88 632 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 AGTPBP1Q9UPW5 1226 aa8.31□□□□□ -1.08
CEACAM1-208ENST00000403461 TRIOBPQ9H2D6 2365 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 BRCA2P51587 3418 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 CIAO1O76071 339 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 TIAF1O95411 115 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 HMGCRP04035 888 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 GCLCP48506 637 aaPredicted RBP8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 LMNB2Q03252 620 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 PICALMQ13492 652 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 FAM110CQ1W6H9 321 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 CCDC184Q52MB2 194 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 METTL16Q86W50 562 aaKnown RBP8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 ANKRD13CQ8N6S4 541 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 WDR89Q96FK6 387 aaPredicted RBP8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 PAWRQ96IZ0 340 aaKnown RBP8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 UBL7Q96S82 380 aaPredicted RBP8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 MIR1-1HGQ9H1L0 117 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 PAK6Q9NQU5 681 aaPredicted RBP8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 STAP2Q9UGK3 403 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 AFG3L2Q9Y4W6 797 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 PCDHB5Q9Y5E4 795 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 LAMB1P07942 1786 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 OTOFQ9HC10 1997 aa8.3□□□□□ -1.08
CEACAM1-208ENST00000403461 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 DYRK3O43781 588 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 UBTFL1P0CB47 393 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 TCF3P15923 654 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 BMP8BP34820 402 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 IL15P40933 162 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 SOX4Q06945 474 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 CAMK2GQ13555 558 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 CCDC84Q86UT8 332 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 TRIM42Q8IWZ5 723 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 C7orf61Q8IZ16 206 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 GAL3ST3Q96A11 431 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 MEGF10Q96KG7 1140 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 RHOVQ96L33 236 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 USP44Q9H0E7 712 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 SIL1Q9H173 461 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 C11orf49Q9H6J7 331 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 ABCF2Q9UG63 623 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 ATRNL1Q5VV63 1379 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 ECM29Q5VYK3 1845 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 ARAP2Q8WZ64 1704 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 GAKO14976 1311 aa8.29□□□□□ -1.08
CEACAM1-208ENST00000403461 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 MAP4K4O95819 1239 aaPredicted RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 PF4P02776 101 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 ADH5P11766 374 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 DRD2P14416 443 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 BTDP43251 543 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 RFX5P48382 616 aaPredicted RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 GSTO1P78417 241 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 UVSSAQ2YD98 709 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 ZFPM1Q8IX07 1006 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 CCAR1Q8IX12 1150 aaKnown RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 DEFB123Q8N688 67 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 FAM46AQ96IP4 442 aaKnown RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 OSBPL5Q9H0X9 879 aaPredicted RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 AS3MTQ9HBK9 375 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 PCDHGC5Q9Y5F6 944 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 PDS5AQ29RF7 1337 aaKnown RBP8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 RPTORQ8N122 1335 aa8.28□□□□□ -1.08
CEACAM1-208ENST00000403461 CENPFP49454 3210 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 DDTLA6NHG4 134 aaPredicted RBP8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 LDHCP07864 332 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 PHKA1P46020 1223 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 PREPP48147 710 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 IRX3P78415 501 aaPredicted RBP8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 ID3Q02535 119 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 SPP2Q13103 211 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 SEPT6Q14141 434 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 MVPQ14764 893 aaKnown RBP8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 LRIT3Q3SXY7 679 aa8.27□□□□□ -1.09
CEACAM1-208ENST00000403461 ZC3H12AQ5D1E8 599 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms