RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SPATS2LQ9NUQ6 558 aaKnown RBP18.7■□□□□ 0.58
PTPRA-205ENST00000399903 CCDC194A0A1B0GVG4 234 aa18.7■□□□□ 0.58
PTPRA-205ENST00000399903 LDHBP07195 334 aaKnown RBP18.7■□□□□ 0.58
PTPRA-205ENST00000399903 NDST4Q9H3R1 872 aa18.7■□□□□ 0.58
PTPRA-205ENST00000399903 TAF1DQ9H5J8 278 aaPredicted RBP18.7■□□□□ 0.58
PTPRA-205ENST00000399903 ATP8A1Q9Y2Q0 1164 aa18.7■□□□□ 0.58
PTPRA-205ENST00000399903 DAPK3O43293 454 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 KLRC1P26715 233 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 RAPGEF1Q13905 1077 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 TRIM68Q6AZZ1 485 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 RUFY4Q6ZNE9 571 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 CCDC197Q8NCU1 140 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 TBC1D5Q92609 795 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 PACSIN1Q9BY11 444 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 PNMA2Q9UL42 364 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 C6orf229H3BNL8 230 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 CCNE1P24864 410 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 TFAP4Q01664 338 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 INF2Q27J81 1249 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 MIIPQ5JXC2 388 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 PARD3BQ8TEW8 1205 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 TBC1D22AQ8WUA7 517 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 PRCCQ92733 491 aaPredicted RBP18.69■□□□□ 0.58
PTPRA-205ENST00000399903 TMEM60Q9H2L4 133 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 LRRC4CQ9HCJ2 640 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 GOLGA8HP0CJ92 632 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 DHX9Q08211 1270 aaKnown RBP18.69■□□□□ 0.58
PTPRA-205ENST00000399903 LRRC41Q15345 812 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 ZKSCAN8Q15776 578 aaPredicted RBP18.69■□□□□ 0.58
PTPRA-205ENST00000399903 SRBD1Q8N5C6 995 aaKnown RBP18.69■□□□□ 0.58
PTPRA-205ENST00000399903 ADAMTS1Q9UHI8 967 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 STX8Q9UNK0 236 aa18.69■□□□□ 0.58
PTPRA-205ENST00000399903 AP1G2O75843 785 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 SERPINB2P05120 415 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 PRLRP16471 622 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 ITIH3Q06033 890 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 TROAPQ12815 778 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 PRPF4BQ13523 1007 aaKnown RBP18.68■□□□□ 0.58
PTPRA-205ENST00000399903 NAALADL2Q58DX5 795 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 AP1ARQ63HQ0 302 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 KIF2BQ8N4N8 673 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 ANKS4BQ8N8V4 417 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 NEUROG2Q9H2A3 272 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
PTPRA-205ENST00000399903 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
PTPRA-205ENST00000399903 SLURP2P0DP57 97 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 GRAPQ13588 217 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 STAG2Q8N3U4 1231 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 GRAPLQ8TC17 118 aaPredicted RBP18.68■□□□□ 0.58
PTPRA-205ENST00000399903 LRRC45Q96CN5 670 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 SPAG5Q96R06 1193 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 PYM1Q9BRP8 204 aaKnown RBP18.68■□□□□ 0.58
PTPRA-205ENST00000399903 MXD3Q9BW11 206 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 AMACRQ9UHK6 382 aa18.68■□□□□ 0.58
PTPRA-205ENST00000399903 PRPF3O43395 683 aaKnown RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 PLCG1P19174 1290 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 IRX1P78414 480 aaPredicted RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 UAP1Q16222 522 aaPredicted RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 CAPRIN2Q6IMN6 1127 aaKnown RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 ZNF662Q6ZS27 426 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 MGARPQ8TDB4 240 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 GYS1P13807 737 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 VWA3BQ502W6 1294 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 GIMAP8Q8ND71 665 aaPredicted RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 CELF4Q9BZC1 486 aaKnown RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 MKNK2Q9HBH9 465 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 TULP1O00294 542 aaPredicted RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 POLR2FP61218 127 aaKnown RBP18.67■□□□□ 0.58
PTPRA-205ENST00000399903 RPS6KA1Q15418 735 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 PANK4Q9NVE7 773 aa18.67■□□□□ 0.58
PTPRA-205ENST00000399903 CALR3Q96L12 384 aaKnown RBP18.66■□□□□ 0.58
PTPRA-205ENST00000399903 SLC12A6Q9UHW9 1150 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 KLRC4O43908 158 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 LONP1P36776 959 aaKnown RBP18.66■□□□□ 0.58
PTPRA-205ENST00000399903 SLCO1A2P46721 670 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 BYSLQ13895 437 aaKnown RBP18.66■□□□□ 0.58
PTPRA-205ENST00000399903 AGAP11Q8TF27 550 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 RUBCNQ92622 972 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 SAAL1Q96ER3 474 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 CHMP6Q96FZ7 201 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 DHTKD1Q96HY7 919 aaPredicted RBP18.66■□□□□ 0.58
PTPRA-205ENST00000399903 PAGR1Q9BTK6 254 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 CACNA1SQ13698 1873 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 BTAF1O14981 1849 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 CCT8L1PA6NM43 557 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 RTN2O75298 545 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 TATDN2Q93075 761 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 UIMC1Q96RL1 719 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 PLCB1Q9NQ66 1216 aa18.66■□□□□ 0.58
PTPRA-205ENST00000399903 MYH6P13533 1939 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 MMEP08473 750 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 SCG2P13521 617 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 HSPA9P38646 679 aaKnown RBP18.65■□□□□ 0.58
PTPRA-205ENST00000399903 XRCC4Q13426 336 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 SLC9C1Q4G0N8 1177 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 THEMIS2Q5TEJ8 643 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 TLDC1Q6P9B6 456 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 SPDYE1Q8NFV5 336 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms