RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PPP1R42Q7Z4L9 355 aa9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 MRPL39Q9NYK5 338 aaKnown RBP9.21□□□□□ -0.94
CACNA1C-220ENST00000399655 ASNA1O43681 348 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 THOC5Q13769 683 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 MAML1Q92585 1016 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 SCN3BQ9NY72 215 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CNOT7Q9UIV1 285 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CITO14578 2027 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 COG2Q14746 738 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 SPOPLQ6IQ16 392 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 PCGF5Q86SE9 256 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 MINK1Q8N4C8 1332 aaPredicted RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 SUPT3HB4E1H0 165 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CFLARO15519 480 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 DIS3LQ8TF46 1054 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 NNTQ13423 1086 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 IMPG1Q17R60 797 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 TMEM161AQ9NX61 479 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CA4P22748 312 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 LGALS3BPQ08380 585 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 B3GALT6Q96L58 329 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 C7orf25Q9BPX7 421 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 USTQ9Y2C2 406 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 TARSL2A2RTX5 802 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 ATP8B1O43520 1251 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 SNX2O60749 519 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 SH3GLB1Q9Y371 365 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CCDC162PA2VCL2 907 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 GNB5O14775 395 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 NCF2P19878 526 aaPredicted RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 ABCD1P33897 745 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 COX10Q12887 443 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 ULK3Q6PHR2 472 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 ZNF280BQ86YH2 543 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 TMIEQ8NEW7 156 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 GATAD2BQ8WXI9 593 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 EPN3Q9H201 632 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 ADNPQ9H2P0 1102 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 IFNKQ9P0W0 207 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 NPHP3Q7Z494 1330 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 BTBD18B2RXH4 712 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 SPTLC2O15270 562 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 YWHAGP61981 247 aaKnown RBP eCLIP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 SLC17A8Q8NDX2 589 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CLHC1Q8NHS4 586 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 PANX2Q96RD6 677 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CLCC1Q96S66 551 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 TRPC4Q9UBN4 977 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 hCG_2014768A0A024R1R8 64 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CCT3P49368 545 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 ARL4CP56559 192 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 STRNO43815 780 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CCT2P78371 535 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 MAGEA2P43356 314 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 PAPOLAP51003 745 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 GNPTABQ3T906 1256 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CCDC80Q76M96 950 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 KLHL7Q8IXQ5 586 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 DPP10Q8N608 796 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 EFHBQ8N7U6 833 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 STKLD1Q8NE28 680 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 BEGAINQ9BUH8 593 aa9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 CPSF3Q9UKF6 684 aaKnown RBP9.2□□□□□ -0.94
CACNA1C-220ENST00000399655 NCAM1P13591 858 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 FAPQ12884 760 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 COLGALT2Q8IYK4 626 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 TEKT3Q9BXF9 490 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 SARS2Q9NP81 518 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 LCMT1Q9UIC8 334 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 FYCO1Q9BQS8 1478 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 MAPK1P28482 360 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 SDE2Q6IQ49 451 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 C5orf58C9J3I9 102 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 EFTUD2Q15029 972 aaKnown RBP eCLIP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 ST20-MTHFSA0A0A6YYL1 179 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 MTHFSP49914 203 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 ELF2Q15723 593 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 APOL4Q9BPW4 351 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 PLEKHA5Q9HAU0 1116 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 PDZK1P1A8MUH7 402 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 STAT5AP42229 794 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 STAT5BP51692 787 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 LLPHQ9BRT6 129 aaKnown RBP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 ALG1Q9BT22 464 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 VAT1LQ9HCJ6 419 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 RGS10O43665 173 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 HSD3B1P14060 373 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 NUP107P57740 925 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 E2F5Q15329 346 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 DENND6BQ8NEG7 585 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 CENPTQ96BT3 561 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 FYNP06241 537 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 BTBD6Q96KE9 485 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 THTPAQ9BU02 230 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 EXTL3O43909 919 aa9.19□□□□□ -0.94
CACNA1C-220ENST00000399655 ERN1O75460 977 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms