RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 GMCL1Q96IK5 515 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 HIC2Q96JB3 615 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 NLRP3Q96P20 1036 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 DESI2Q9BSY9 194 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 TMEM106CQ9BVX2 250 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 ITM2BQ9Y287 266 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 A0A0B4J203 849 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 FRS3O43559 492 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 CYP21A2P08686 494 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 XBP1P17861 261 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 GIPRP48546 466 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZNF445P59923 1031 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 NECTIN1Q15223 517 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 ARHGAP29Q52LW3 1261 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 FIP1L1Q6UN15 594 aaKnown RBP6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 TTC6Q86TZ1 520 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 TEX11Q8IYF3 940 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 CCDC24Q8N4L8 307 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 RUFY2Q8WXA3 655 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 DPF3Q92784 378 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 CHCHD6Q9BRQ6 235 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 NOC4LQ9BVI4 516 aaKnown RBP6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 USP21Q9UK80 565 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 PTPN22Q9Y2R2 807 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 A6NNZ2 444 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 AP5Z1O43299 807 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 SGTAO43765 313 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 BAG2O95816 211 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 CYP11A1P05108 521 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 SLC20A2Q08357 652 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 CCDC173Q0VFZ6 552 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 AP3B2Q13367 1082 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 TOB2Q14106 344 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 DNTTIP2Q5QJE6 756 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 TATDN1Q6P1N9 297 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 CEP57L1Q8IYX8 460 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 EPS8L3Q8TE67 593 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 SLC7A3Q8WY07 619 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZNF396Q96N95 335 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 TMEM121BQ9BXQ6 578 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 AAASQ9NRG9 546 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 WDR35Q9P2L0 1181 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 EP400Q96L91 3159 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 B2RBV5 119 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 RASA4BC9J798 803 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 GREM1O60565 184 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 TAF5LO75529 589 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 IL2RBP14784 551 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 RFX5P48382 616 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 NLRP12P59046 1061 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 MOGSQ13724 837 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 GRIN2CQ14957 1233 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 HLFQ16534 295 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 MRM1Q6IN84 353 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 TLDC1Q6P9B6 456 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 BNC2Q6ZN30 1099 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 ENOSF1Q7L5Y1 443 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 GALNT13Q8IUC8 556 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 LEO1Q8WVC0 666 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 SYAP1Q96A49 352 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 ASB2Q96Q27 587 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 RMDN3Q96TC7 470 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 DHRS4Q9BTZ2 278 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 HELLSQ9NRZ9 838 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 TTC41PQ6P2S7 1318 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 WTIPA6NIX2 430 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 UBE2Q2LH0YL09 131 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 AHCYL1O43865 530 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 DNTTP04053 509 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 KRT1P04264 644 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 HOXB7P09629 217 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 PDE6CP51160 858 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 RAC1P63000 192 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 CCNG2Q16589 344 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 PTPN21Q16825 1174 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 SDCCAG8Q86SQ7 713 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 LUZP1Q86V48 1076 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 ST13P5Q8NFI4 369 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 HDAC2Q92769 488 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 DCAF5Q96JK2 942 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 GSDMAQ96QA5 445 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 GTPBP4Q9BZE4 634 aaKnown RBP6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 FBXL5Q9UKA1 691 aa6.93□□□□□ -1.3
TRAPPC13-202ENST00000399438 MCM2P49736 904 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 MRPS35P82673 323 aaKnown RBP6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 ABCB5Q2M3G0 1257 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 CNNM4Q6P4Q7 775 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 GPR155Q7Z3F1 870 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 MYLK4Q86YV6 388 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 PTCD2Q8WV60 388 aaKnown RBP6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 MAP4K1Q92918 833 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 TMEM74Q96NL1 305 aa6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 WDR12Q9GZL7 423 aaKnown RBP6.92□□□□□ -1.3
TRAPPC13-202ENST00000399438 SAP30BPQ9UHR5 308 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms