RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 KNOP1Q1ED39 458 aaKnown RBP19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CEP55Q53EZ4 464 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 EPM2AIP1Q7L775 607 aaPredicted RBP19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 OTOP1Q7RTM1 612 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 NIPA1Q7RTP0 329 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 FRMD5Q7Z6J6 570 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MCF2L2Q86YR7 1114 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 JDP2Q8WYK2 163 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 RPGRIP1Q96KN7 1286 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 RIT2Q99578 217 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 EIF2AK1Q9BQI3 630 aaKnown RBP19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 IRX2Q9BZI1 471 aaPredicted RBP19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 METTL14Q9HCE5 456 aaKnown RBP19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CEP72Q9P209 647 aa19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 POTEFA5A3E0 1075 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CFBP00751 764 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 POTEIP0CG38 1075 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 BCRP11274 1271 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 HOXA13P31271 388 aaPredicted RBP19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 STAT3P40763 770 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PTGER2P43116 358 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CHMP4BP1P59074 171 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CXCL9Q07325 125 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 KIF5AQ12840 1032 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 LRRC41Q15345 812 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 NFIL3Q16649 462 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CCDC122Q5T0U0 273 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 POTEGQ6S5H5 508 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 POTEEQ6S8J3 1075 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TMCO3Q6UWJ1 677 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 GJA10Q969M2 543 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MMRN2Q9H8L6 949 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 LUC7LQ9NQ29 371 aaKnown RBP19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 FAM53CQ9NYF3 392 aa19.57■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MEIS1O00470 390 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 WDR46O15213 610 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ICAM1P05362 532 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 VAV2P52735 878 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ZNF280AP59817 542 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 SNAP25P60880 206 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ADAM9Q13443 819 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 STXBP4Q6ZWJ1 553 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PRPF38AQ8NAV1 312 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 JAKMIP2Q96AA8 810 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 WNT10BO00744 389 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 EIF3DO15371 548 aaKnown RBP eCLIP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TBCAO75347 108 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 HSD17B4P51659 736 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PRELPP51888 382 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 HERVK_113P62684 666 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 BRD3Q15059 726 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 LRCH2Q5VUJ6 765 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CACNA2D4Q7Z3S7 1137 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 LDHDQ86WU2 507 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PURBQ96QR8 312 aaKnown RBP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 NACC1Q96RE7 527 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MYOZ2Q9NPC6 264 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MYO6Q9UM54 1294 aa19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ZBTB12Q9Y330 459 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB1-204ENST00000399084 UBE4BO95155 1302 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 SLC16A3O15427 465 aaKnown RBP19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PABPC4Q13310 644 aaKnown RBP eCLIP19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 EPHA7Q15375 998 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 KIAA1755Q5JYT7 1200 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PAPD7Q5XG87 772 aaKnown RBP19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 REEP2Q9BRK0 252 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TANGO6Q9C0B7 1094 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TMEM39BQ9GZU3 492 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 KIAA1683Q9H0B3 1180 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 GUCA1BQ9UMX6 200 aa19.55■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CTAGE15A4D2H0 777 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CTAGE8P0CG41 777 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CLCN6P51797 869 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 AMPD2Q01433 879 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 DALRD3Q5D0E6 543 aaKnown RBP19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CTAGE6Q86UF2 777 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CTAGE4Q8IX94 777 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 SMAP1Q8IYB5 467 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 KRT222Q8N1A0 295 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 LRRN4CLQ8ND94 238 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 BAP1Q92560 729 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TAOK3Q9H2K8 898 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 FAM207AQ9NSI2 230 aaPredicted RBP19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TYW1Q9NV66 732 aaKnown RBP19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 ODF2LQ9ULJ1 636 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CCDC151A5D8V7 595 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 CTNND1O60716 968 aaKnown RBP19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 GAS7O60861 476 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 FAM193AP78312 1265 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PDXDC1Q6P996 788 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 GLIS3Q8NEA6 775 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 TRIM58Q8NG06 486 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 HNRNPLLQ8WVV9 542 aaKnown RBP19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 HOOK2Q96ED9 719 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 MAF1Q9H063 256 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 BHMT2Q9H2M3 363 aa19.54■□□□□ 0.72
HLA-DQB1-204ENST00000399084 COL4A5P29400 1685 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms