RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 CFAP73A6NFT4 308 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 MEIS1O00470 390 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 TNNC2P02585 160 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 CAPRIN2Q6IMN6 1127 aaKnown RBP9.33□□□□□ -0.92
CTNND1-205ENST00000399050 NSMFQ6X4W1 530 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 ARMC2Q8NEN0 867 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 DRC3Q9H069 523 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 PCIF1Q9H4Z3 704 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.33□□□□□ -0.92
CTNND1-205ENST00000399050 A0A0G2JND7 137 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 POLR2BP30876 1174 aaKnown RBP9.33□□□□□ -0.92
CTNND1-205ENST00000399050 BTDP43251 543 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 EPN3Q9H201 632 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 TAF1DQ9H5J8 278 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-205ENST00000399050 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-205ENST00000399050 SORBS3O60504 671 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 GRAMD1BQ3KR37 738 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 ARL6IP4Q66PJ3 421 aaKnown RBP9.33□□□□□ -0.92
CTNND1-205ENST00000399050 FAM47EQ6ZV65 393 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 EPM2AIP1Q7L775 607 aaPredicted RBP9.33□□□□□ -0.92
CTNND1-205ENST00000399050 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 HAUS8Q9BT25 410 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 TRAIPQ9BWF2 469 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 CXorf56Q9H5V9 222 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 FGFR1OP2Q9NVK5 253 aa9.33□□□□□ -0.92
CTNND1-205ENST00000399050 MEFVO15553 781 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 DYNC1I2Q13409 638 aaKnown RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 KRT80Q6KB66 452 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 NME8Q8N427 588 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 CEP70Q8NHQ1 597 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 ZNF473Q8WTR7 871 aaKnown RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 OSBPL1AQ9BXW6 950 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 TESPA1A2RU30 521 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 LIFRP42702 1097 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 BASP1P80723 227 aaKnown RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 BIRC2Q13490 618 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 GNPTABQ3T906 1256 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 CHMP6Q96FZ7 201 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 PACSIN2Q9UNF0 486 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 ATP10DQ9P241 1426 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 GPC4O75487 556 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 PLEKHA8P1O95397 391 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 CHGBP05060 677 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 PLA2G4BP0C869 781 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 YARSP54577 528 aaKnown RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 DRP2Q13474 957 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 ARHGEF16Q5VV41 709 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 TBC1D22AQ8WUA7 517 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 MLXIPLQ9NP71 852 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 MCF2LO15068 1137 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 ZNF185O15231 689 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 DNAJC8O75937 253 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 ATG16L1Q676U5 607 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 PICK1Q9NRD5 415 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 IGSF1Q8N6C5 1336 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 EIF3HO15372 352 aaKnown RBP eCLIP9.32□□□□□ -0.922e-7■■□□□ 12
CTNND1-205ENST00000399050 HOXA7P31268 230 aaPredicted RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 RANBP1P43487 201 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 RAD23BP54727 409 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
CTNND1-205ENST00000399050 IQCB1Q15051 598 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 CYB5R4Q7L1T6 521 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 HDAC11Q96DB2 347 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 ACCSQ96QU6 501 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 PIGSQ96S52 555 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 MMS19Q96T76 1030 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 SH3GL3Q99963 347 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 ANKFY1Q9P2R3 1169 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 GINS2Q9Y248 185 aa9.32□□□□□ -0.92
CTNND1-205ENST00000399050 UGGT1Q9NYU2 1555 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 IQANK1A0A1B0GTG1 560 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 RASA4BC9J798 803 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 RASA4O43374 803 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 RWDD2BP57060 319 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 IL1RL1Q01638 556 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 ART3Q13508 389 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 MFSD14BQ5SR56 506 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 CENPUQ71F23 418 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 RUBCNQ92622 972 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 CSRNP1Q96S65 589 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 VIPAS39Q9H9C1 493 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 SAYSD1Q9NPB0 183 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 PCDHA1Q9Y5I3 950 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 FOXN1O15353 648 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 ASPRV1Q53RT3 343 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 SHC4Q6S5L8 630 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 PYROXD1Q8WU10 500 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 TGS1Q96RS0 853 aaKnown RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 SERPINI1Q99574 410 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 EFHD1Q9BUP0 239 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 TRIM55Q9BYV6 548 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 STOML1Q9UBI4 398 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 HPCAL4Q9UM19 191 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 MRPL11Q9Y3B7 192 aaKnown RBP9.31□□□□□ -0.92
CTNND1-205ENST00000399050 A6NJR5 290 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 CFLARO15519 480 aa9.31□□□□□ -0.92
CTNND1-205ENST00000399050 TAF12Q16514 161 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms