RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 SCTRP47872 440 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 TROAPQ12815 778 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 KCNJ12Q14500 433 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 SEPT2Q15019 361 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 SLC35G1Q2M3R5 365 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 ACCSLQ4AC99 568 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 TCP11X2Q5H9J9 407 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 ANGEL2Q5VTE6 544 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 CDCA2Q69YH5 1023 aaPredicted RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 SH3RF1Q7Z6J0 888 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 FANCBQ8NB91 859 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 SHISA4Q96DD7 197 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 SPDL1Q96EA4 605 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 TMEM87BQ96K49 555 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 ATP6V1G3Q96LB4 118 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 GSDMAQ96QA5 445 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 TMEM47Q9BQJ4 181 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 GLIS2Q9BZE0 524 aaPredicted RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 PPANQ9NQ55 473 aaKnown RBP11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 ETAA1Q9NY74 926 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 HACL1Q9UJ83 578 aa11.15□□□□□ -0.62
HMGCLL1-205ENST00000398661 LAMA2P24043 3122 aaKnown RBP11.15□□□□□ -0.63
HMGCLL1-205ENST00000398661 HMGB1P1B2RPK0 211 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 BTBD18B2RXH4 712 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 FGRP09769 529 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 POTEJP0CG39 1038 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 CYLC1P35663 651 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 SLC16A2P36021 539 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 GABPAQ06546 454 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 ITGB3BPQ13352 177 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 NTRK3Q16288 839 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 GLE1Q53GS7 698 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 LACTB2Q53H82 288 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 C3orf20Q8ND61 904 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 PNMA1Q8ND90 353 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 C1orf131Q8NDD1 294 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 HDAC9Q9UKV0 1011 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 PCDHB6Q9Y5E3 794 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 CNTNAP1P78357 1384 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 DDX60LQ5H9U9 1706 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 A0A087X0B3 334 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 MACROD2A1Z1Q3 448 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 GMNCA6NCL1 334 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 ORC4O43929 436 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 ATP6V1G2O95670 118 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 GH2P01242 217 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 ECE1P42892 770 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 VAV2P52735 878 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 RTN1Q16799 776 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 RILPL1Q5EBL4 403 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 TAX1BP1Q86VP1 789 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 SRBD1Q8N5C6 995 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 PIK3R5Q8WYR1 880 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 DUSP10Q9Y6W6 482 aa11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 ZNF646O15015 1829 aaPredicted RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 POLR2AP24928 1970 aaKnown RBP11.14□□□□□ -0.63
HMGCLL1-205ENST00000398661 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 CLSTN1O94985 981 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 SAFBQ15424 915 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 NBPF12Q5TAG4 269 aaPredicted RBP11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 C8orf74Q6P047 294 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 KCTD1Q719H9 257 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 MICAL1Q8TDZ2 1067 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 NOD2Q9HC29 1040 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 RWDD2AQ9UIY3 292 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 CAPN11Q9UMQ6 739 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 DNAJC8O75937 253 aaPredicted RBP11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 IPO7O95373 1038 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 FAM153BP0C7A2 387 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 PRLRP16471 622 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 LIFRP42702 1097 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 TNIP1Q15025 636 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 MEA1Q16626 185 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 FAM153CQ494X1 144 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 RRAGBQ5VZM2 374 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 DIS3L2Q8IYB7 885 aaKnown RBP11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 MB21D1Q8N884 522 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 AGBL3Q8NEM8 1001 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 TBC1D31Q96DN5 1066 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 SEC16BQ96JE7 1060 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 GPCPD1Q9NPB8 672 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 VPS54Q9P1Q0 977 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 FAM153AQ9UHL3 310 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 CEP131Q9UPN4 1083 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 NAV1Q8NEY1 1877 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 MAST2Q6P0Q8 1798 aa11.13□□□□□ -0.63
HMGCLL1-205ENST00000398661 BUB1BO60566 1050 aaPredicted RBP11.12□□□□□ -0.63
HMGCLL1-205ENST00000398661 MMP1P03956 469 aa11.12□□□□□ -0.63
HMGCLL1-205ENST00000398661 HLA-DOAP06340 250 aa11.12□□□□□ -0.63
HMGCLL1-205ENST00000398661 ELF3P78545 371 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms