RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TEX2Q8IWB9 1127 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 NUDT10Q8NFP7 164 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 SH3TC2Q8TF17 1288 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 NUDT11Q96G61 164 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 CSRNP2Q9H175 543 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 L2HGDHQ9H9P8 463 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 MARCH2Q9P0N8 246 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 RBPJLQ9UBG7 517 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 APEX2Q9UBZ4 518 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 SUGT1Q9Y2Z0 365 aa4.08□□□□□ -1.76
CD47-203ENST00000398258 IQCA1LA6NCM1 817 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 C2orf71A6NGG8 1288 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 DIAPH1O60610 1272 aaKnown RBP4.07□□□□□ -1.76
CD47-203ENST00000398258 NAT2P11245 290 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 LMO1P25800 156 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 INHBCP55103 352 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 NFATC3Q12968 1075 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 AGBL4Q5VU57 503 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 Q6ZPA2 131 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 BHLHA9Q7RTU4 235 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 ZC3H18Q86VM9 953 aaKnown RBP4.07□□□□□ -1.76
CD47-203ENST00000398258 SYNPOQ8N3V7 929 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 KLHL36Q8N4N3 616 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 LARP4BQ92615 738 aaKnown RBP4.07□□□□□ -1.76
CD47-203ENST00000398258 PPP1R14AQ96A00 147 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 RCC1LQ96I51 464 aaKnown RBP4.07□□□□□ -1.76
CD47-203ENST00000398258 LGR4Q9BXB1 951 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 GBP3Q9H0R5 595 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 TMX1Q9H3N1 280 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 KANSL2Q9H9L4 492 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 WHRNQ9P202 907 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 ZDHHC9Q9Y397 364 aa4.07□□□□□ -1.76
CD47-203ENST00000398258 SBNO2Q9Y2G9 1366 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 CCDC85CA6NKD9 419 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 PPM1BO75688 479 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 KRT4P19013 534 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 FPR2P25090 351 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 MCM7P33993 719 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 INF2Q27J81 1249 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 PHF19Q5T6S3 580 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 MILR1Q7Z6M3 343 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 LRRC47Q8N1G4 583 aaKnown RBP4.06□□□□□ -1.76
CD47-203ENST00000398258 ZBTB38Q8NAP3 1195 aaPredicted RBP4.06□□□□□ -1.76
CD47-203ENST00000398258 IL17DQ8TAD2 202 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 CACTINQ8WUQ7 758 aaKnown RBP4.06□□□□□ -1.76
CD47-203ENST00000398258 ZG16BQ96DA0 208 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 PUS7Q96PZ0 661 aaKnown RBP4.06□□□□□ -1.76
CD47-203ENST00000398258 CRAMP1Q96RY5 1269 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 SPATA9Q9BWV2 254 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 CGGBP1Q9UFW8 167 aaPredicted RBP4.06□□□□□ -1.76
CD47-203ENST00000398258 ADAM29Q9UKF5 820 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 CROTQ9UKG9 612 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 DIS3Q9Y2L1 958 aaKnown RBP4.06□□□□□ -1.76
CD47-203ENST00000398258 BACE2Q9Y5Z0 518 aa4.06□□□□□ -1.76
CD47-203ENST00000398258 KDM2BQ8NHM5 1336 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 CCDC163A0A0D9SF12 145 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 NPHP3-ACAD11A0A0J9YXS1 232 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 A0A1W2PQU0 124 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 NPHS1O60500 1241 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 KLHL18O94889 574 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 THBDP07204 575 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 PAMP19021 973 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 SEPHS1P49903 392 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 SSRP1Q08945 709 aaKnown RBP4.05□□□□□ -1.76
CD47-203ENST00000398258 DPY19L2P1Q6NXN4 242 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 ZNF662Q6ZS27 426 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 HOMER1Q86YM7 354 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 FUKQ8N0W3 1084 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 ARHGEF39Q8N4T4 335 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 ARRDC4Q8NCT1 418 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 ZSWIM2Q8NEG5 633 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 SEC14L1Q92503 715 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 APPBP2Q92624 585 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 EDAQ92838 391 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 MRGPRX3Q96LB0 322 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 LRRC37BQ96QE4 947 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 APBA2Q99767 749 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 AP5M1Q9H0R1 490 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 ARHGEF4Q9NR80 690 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 CLEC1BQ9P126 229 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 DMRT1Q9Y5R6 373 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 PTCH2Q9Y6C5 1203 aa4.05□□□□□ -1.76
CD47-203ENST00000398258 ESYT3A0FGR9 886 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 CDC45O75419 566 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 KCNH1O95259 989 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 FAM153BP0C7A2 387 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 CYP4F3Q08477 520 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 CSRP2Q16527 193 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 SV2CQ496J9 727 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 C16orf86Q6ZW13 317 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 GLCCI1Q86VQ1 547 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 NLRP10Q86W26 655 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 ZNF227Q86WZ6 799 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 BRINP2Q9C0B6 783 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 FANCLQ9NW38 375 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 PFDN2Q9UHV9 154 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 AKT3Q9Y243 479 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 PTPN22Q9Y2R2 807 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 EMC9Q9Y3B6 208 aa4.04□□□□□ -1.76
CD47-203ENST00000398258 C22orf46C9J442 243 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms