RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 PTPROQ16827 1216 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 HAUS3Q68CZ6 603 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 KSR1Q8IVT5 923 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 GRAMD1CQ8IYS0 662 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 MYOCDQ8IZQ8 938 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 MIGA1Q8NAN2 632 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 RRP36Q96EU6 259 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 PBKQ96KB5 322 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM47Q9BQJ4 181 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 SUDS3Q9H7L9 328 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 CHUKO15111 745 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 FLOT1O75955 427 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 LDHBP07195 334 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 MRPS25P82663 173 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 CALCOCO2Q13137 446 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 PDXDC1Q6P996 788 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 DZIP1Q86YF9 867 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 ERMNQ8TAM6 284 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 CERKQ8TCT0 537 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 IQCGQ9H095 443 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 SEC31BQ9NQW1 1179 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 DMGDHQ9UI17 866 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 UTP11Q9Y3A2 253 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 ZPR1O75312 459 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 STAMBPO95630 424 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 CTNNA2P26232 953 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 USP11P51784 963 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 EARS2Q5JPH6 523 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 BBOX1O75936 387 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 HSPA9P38646 679 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 HIBCHQ6NVY1 386 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 APBB1IPQ7Z5R6 666 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 PRPF38AQ8NAV1 312 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF384Q8TF68 577 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 BAP1Q92560 729 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 MOV10L1Q9BXT6 1211 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 CARD9Q9H257 536 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 NHEJ1Q9H9Q4 299 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 PRDM1O75626 825 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 GUCY2DQ02846 1103 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 DIXDC1Q155Q3 683 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 LRRC23Q53EV4 343 aaPredicted RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 UHMK1Q8TAS1 419 aaKnown RBP5.95□□□□□ -1.46
PTPRD-205ENST00000397611 CHP1Q99653 195 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 BLOC1S4Q9NUP1 217 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 IKBKGQ9Y6K9 419 aa5.95□□□□□ -1.46
PTPRD-205ENST00000397611 STXBP3O00186 592 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PDXKO00764 312 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF76P36508 570 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PDE1CQ14123 709 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TCEAL1Q15170 157 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 DBN1Q16643 649 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 FYB2Q5VWT5 728 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TBC1D1Q86TI0 1168 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM174Q8WUU8 243 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SAAL1Q96ER3 474 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM109Q9BVC6 243 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 DPH5Q9H2P9 285 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 EIF3HO15372 352 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 RASA1P20936 1047 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM119Q4V9L6 283 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 GSTA5Q7RTV2 222 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SYNE4Q8N205 404 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 CCDC197Q8NCU1 140 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PIK3R5Q8WYR1 880 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ZKSCAN3Q9BRR0 538 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 EHD4Q9H223 541 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ACTR5Q9H9F9 607 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ARHGAP20Q9P2F6 1191 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 NWD2Q9ULI1 1742 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 RNF225M0QZC1 329 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TXNDC9O14530 226 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PAEPP09466 180 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SLMAPQ14BN4 828 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 FAM83BQ5T0W9 1011 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 KDM7AQ6ZMT4 941 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 C16orf86Q6ZW13 317 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 CCDC65Q8IXS2 484 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SDR42E1Q8WUS8 393 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ABTB1Q969K4 478 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 FAM20AQ96MK3 541 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TSC22D3Q99576 134 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 FAM167BQ9BTA0 163 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SEL1LQ9UBV2 794 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 COL4A3BPQ9Y5P4 624 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 MIF4GDA9UHW6 222 aaKnown RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PPP1R37O75864 691 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PLCG1P19174 1290 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 RASIP1Q5U651 963 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SYCE1Q8N0S2 351 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 MMTAG2Q9BU76 263 aaKnown RBP5.94□□□□□ -1.46
PTPRD-205ENST00000397611 KCND2Q9NZV8 630 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 SERPING1P05155 500 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 NAPAP54920 295 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 TMEM132AQ24JP5 1023 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 MIIPQ5JXC2 388 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF804AQ7Z570 1209 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PARP9Q8IXQ6 854 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 PMM2O15305 246 aa5.94□□□□□ -1.46
PTPRD-205ENST00000397611 GYG1P46976 350 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms