RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 CENPPQ6IPU0 288 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 RETREG2Q8NC44 543 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 TRIM58Q8NG06 486 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 FUT8Q9BYC5 575 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 HDAC9Q9UKV0 1011 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 MYH6P13533 1939 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 SPATA31A6Q5VVP1 1343 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 PPP1R12BO60237 982 aaPredicted RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 ALAS1P13196 640 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 GCFC2P16383 781 aaKnown RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 SLC9A1P19634 815 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 CASP5P51878 434 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 GABPAQ06546 454 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZC2HC1CQ53FD0 456 aaPredicted RBP11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 GJB7Q6PEY0 223 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 REEP2Q9BRK0 252 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 DNAJC18Q9H819 358 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 HYOU1Q9Y4L1 999 aa11.49□□□□□ -0.57
CPSF1P1-201ENST00000397477 ANKRD65E5RJM6 399 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 H3BQF6 201 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 hCG_1984214I3L0E3 225 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 EPB41P11171 864 aaKnown RBP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 STAT2P52630 851 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 KCNA1Q09470 495 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 NAA35Q5VZE5 725 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 C8orf74Q6P047 294 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 NSMFQ6X4W1 530 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 CCDC170Q8IYT3 715 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZNF713Q8N859 430 aaPredicted RBP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 TSGA10Q9BZW7 698 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 TRIM31Q9BZY9 425 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 MYO1AQ9UBC5 1043 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 ANKRD36CQ5JPF3 1778 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 IRS2Q9Y4H2 1338 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 EIF3CLB5ME19 914 aaKnown RBP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 FAM86B1E9PN63 330 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 LRRN2O75325 713 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 FAM86B2P0C5J1 330 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 CYP11B2P19099 503 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 HHIPL2Q6UWX4 724 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 U2AF1L4Q8WU68 220 aaKnown RBP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 DYDC2Q96IM9 177 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 EIF3CQ99613 913 aaKnown RBP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 CEP104O60308 925 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 EXOC3L4Q17RC7 722 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 TMEM39BQ9GZU3 492 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 BCCIPQ9P287 314 aaKnown RBP eCLIP11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 ADAM21Q9UKJ8 722 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 PRR12Q9ULL5 1215 aa11.48□□□□□ -0.57
CPSF1P1-201ENST00000397477 KCNK3O14649 394 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 PALMO75781 387 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 ODR4Q5SWX8 454 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 HS2ST1Q7LGA3 356 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 PACSIN1Q9BY11 444 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 RSPH14Q9UHP6 348 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 EXOC3O60645 756 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 GFPT2O94808 682 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZRANB2O95218 330 aaKnown RBP eCLIP11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 POLR2MP0CAP2 368 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 CASP4P49662 377 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 LRRC1Q9BTT6 524 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 FAM107BQ9H098 131 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 GJA3Q9Y6H8 435 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 ROBO3Q96MS0 1386 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 PDE2AO00408 941 aaPredicted RBP11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZNF263O14978 683 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 STRIP1Q5VSL9 837 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 PPP4R3AQ6IN85 833 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 FAM178BQ8IXR5 827 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 HDAC7Q8WUI4 952 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 SCFD1Q8WVM8 642 aa11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 EIF2AK1Q9BQI3 630 aaKnown RBP11.47□□□□□ -0.57
CPSF1P1-201ENST00000397477 CALUO43852 315 aaPredicted RBP11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 TRIM49P0CI25 452 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 TRIM49CP0CI26 452 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 TUBB2AQ13885 445 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 KCTD16Q68DU8 428 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 PDXDC1Q6P996 788 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 VPS36Q86VN1 386 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 ERGIC2Q96RQ1 377 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 KRT12Q99456 494 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 ZNF577Q9BSK1 485 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 TUBB2BQ9BVA1 445 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 ABCB11O95342 1321 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 CHD4Q14839 1912 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 MYH15Q9Y2K3 1946 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 A0A1W2PRG0 241 aa11.46□□□□□ -0.57
CPSF1P1-201ENST00000397477 RASSF10A6NK89 507 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms