RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ZNF286BP0CG31 522 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 THPOP40225 353 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 ANTXR2P58335 489 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 ZNF200P98182 395 aaPredicted RBP15.72■□□□□ 0.11
SEC13-205ENST00000397101 BECN1Q14457 450 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 HIC1Q14526 733 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 SMAD2Q15796 467 aaKnown RBP15.72■□□□□ 0.11
SEC13-205ENST00000397101 ASPRV1Q53RT3 343 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 HERC4Q5GLZ8 1057 aaPredicted RBP15.72■□□□□ 0.11
SEC13-205ENST00000397101 CELF3Q5SZQ8 465 aaKnown RBP15.72■□□□□ 0.11
SEC13-205ENST00000397101 IFIT1BQ5T764 474 aaKnown RBP15.72■□□□□ 0.11
SEC13-205ENST00000397101 SYNE3Q6ZMZ3 975 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 BRF1Q92994 677 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 LARP6Q9BRS8 491 aaKnown RBP15.72■□□□□ 0.11
SEC13-205ENST00000397101 C16orf70Q9BSU1 422 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 UBA5Q9GZZ9 404 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 RWDD3Q9Y3V2 267 aa15.72■□□□□ 0.11
SEC13-205ENST00000397101 ZNF318Q5VUA4 2279 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 C17orf102A2RUQ5 167 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 GOLGA8HP0CJ92 632 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
SEC13-205ENST00000397101 LTBRP36941 435 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 MCM2P49736 904 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 HSD17B4P51659 736 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 COL9A3Q14050 684 aaPredicted RBP15.71■□□□□ 0.11
SEC13-205ENST00000397101 PKN1Q16512 942 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 HSDL1Q3SXM5 330 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 HFE2Q6ZVN8 426 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 BMP8AQ7Z5Y6 402 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 ADGRF4Q8IZF3 695 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 TMTC2Q8N394 836 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 SPATA33Q96N06 139 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 CLDND1Q9NY35 253 aa15.71■□□□□ 0.11
SEC13-205ENST00000397101 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.7■□□□□ 0.1
SEC13-205ENST00000397101 SH2B2O14492 632 aaPredicted RBP15.7■□□□□ 0.1
SEC13-205ENST00000397101 RGS20O76081 388 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 IRS1P35568 1242 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 APOBRQ0VD83 1088 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 QRICH1Q2TAL8 776 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 RPAINQ86UA6 219 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 VSIG10LQ86VR7 867 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 ATP6V0A1Q93050 837 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 PRRX2Q99811 253 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 PDCD2LQ9BRP1 358 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 CPVLQ9H3G5 476 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 KAT14Q9H8E8 782 aa15.7■□□□□ 0.1
SEC13-205ENST00000397101 KLF18A0A0U1RQI7 1052 aa15.69■□□□□ 0.1
SEC13-205ENST00000397101 H3BRB1 525 aa15.69■□□□□ 0.1
SEC13-205ENST00000397101 GNAT1P11488 350 aa15.69■□□□□ 0.1
SEC13-205ENST00000397101 TOB2Q14106 344 aaPredicted RBP15.69■□□□□ 0.1
SEC13-205ENST00000397101 IGDCC4Q8TDY8 1250 aa15.69■□□□□ 0.1
SEC13-205ENST00000397101 SNX27Q96L92 541 aa15.69■□□□□ 0.1
SEC13-205ENST00000397101 C11orf84Q9BUA3 381 aaPredicted RBP15.69■□□□□ 0.1
SEC13-205ENST00000397101 TUT1Q9H6E5 874 aaKnown RBP15.69■□□□□ 0.1
SEC13-205ENST00000397101 LIMCH1Q9UPQ0 1083 aa15.69■□□□□ 0.1
SEC13-205ENST00000397101 SLC12A7Q9Y666 1083 aa15.69■□□□□ 0.1
SEC13-205ENST00000397101 RALGAPA2Q2PPJ7 1873 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 MBTPS2O43462 519 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 GGPS1O95749 300 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 LINC00271P0C7V0 271 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 STK3Q13188 491 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 SMAD4Q13485 552 aaKnown RBP15.68■□□□□ 0.1
SEC13-205ENST00000397101 FAM26DQ5JW98 314 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 FIBCD1Q8N539 461 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 ENAHQ8N8S7 591 aaPredicted RBP15.68■□□□□ 0.1
SEC13-205ENST00000397101 CLP1Q92989 425 aaKnown RBP15.68■□□□□ 0.1
SEC13-205ENST00000397101 SNX21Q969T3 373 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 ZSCAN31Q96LW9 406 aaPredicted RBP15.68■□□□□ 0.1
SEC13-205ENST00000397101 AMNQ9BXJ7 453 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
SEC13-205ENST00000397101 JMJD4Q9H9V9 463 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 LY9Q9HBG7 655 aa15.68■□□□□ 0.1
SEC13-205ENST00000397101 OPLAHO14841 1288 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 TREHO43280 583 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 CD2BP2O95400 341 aaKnown RBP15.67■□□□□ 0.1
SEC13-205ENST00000397101 CFBP00751 764 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 HSP90AA1P07900 732 aaKnown RBP15.67■□□□□ 0.1
SEC13-205ENST00000397101 SMIM10L2AP0DMW4 78 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 SMIM10L2BP0DMW5 78 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 UBA1P22314 1058 aaKnown RBP15.67■□□□□ 0.1
SEC13-205ENST00000397101 BMPR1AP36894 532 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 LIFRP42702 1097 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 SP2Q02086 613 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 RAB11FIP4Q86YS3 637 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 EDAQ92838 391 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 MTMR8Q96EF0 704 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 PLVAPQ9BX97 442 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 RNPEPQ9H4A4 650 aa15.67■□□□□ 0.1
SEC13-205ENST00000397101 RC3H2Q9HBD1 1191 aaKnown RBP15.67■□□□□ 0.1
SEC13-205ENST00000397101 GOLGA8BA8MQT2 603 aa15.66■□□□□ 0.1
SEC13-205ENST00000397101 K7ELQ4 463 aaPredicted RBP15.66■□□□□ 0.1
SEC13-205ENST00000397101 UPP2O95045 317 aa15.66■□□□□ 0.1
SEC13-205ENST00000397101 LGALS2P05162 132 aa15.66■□□□□ 0.1
SEC13-205ENST00000397101 PARP1P09874 1014 aaKnown RBP15.66■□□□□ 0.1
SEC13-205ENST00000397101 PTPN5P54829 565 aa15.66■□□□□ 0.1
SEC13-205ENST00000397101 ADAM17P78536 824 aa15.66■□□□□ 0.1
SEC13-205ENST00000397101 HYAL1Q12794 435 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms