RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 PSMD10O75832 226 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 PPP1R37O75864 691 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 BMP3P12645 472 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 FXR1P51114 621 aaKnown RBP eCLIP6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 PDE4DQ08499 809 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 COASYQ13057 564 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 QRICH1Q2TAL8 776 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 ANKRD40Q6AI12 368 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 PPP1R2P3Q6NXS1 205 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 TOGARAM2Q6ZUX3 1019 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 FBXO11Q86XK2 927 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 MCF2L2Q86YR7 1114 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 KRT222Q8N1A0 295 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 CSGALNACT2Q8N6G5 542 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 FAXDC2Q96IV6 333 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 KIAA1683Q9H0B3 1180 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 FAM124BQ9H5Z6 455 aaPredicted RBP6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 TYW1Q9NV66 732 aaKnown RBP6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 COL11A1P12107 1806 aaPredicted RBP6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 NFASCO94856 1347 aa6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 ZC3H4Q9UPT8 1303 aaKnown RBP6.65□□□□□ -1.34
RAPGEF4-203ENST00000397087 ADAMTS3O15072 1205 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 SERPING1P05155 500 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 CASP14P31944 242 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 RBM26Q5T8P6 1007 aaKnown RBP6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 DCAF8Q5TAQ9 597 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 USP17L2Q6R6M4 530 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 ZNF215Q9UL58 517 aaPredicted RBP6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 NCANO14594 1321 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 C6orf229H3BNL8 230 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 TEX33O43247 280 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 SLC37A4O43826 429 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 N4BP1O75113 896 aaKnown RBP6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 EEF2P13639 858 aaKnown RBP6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 CYP11B2P19099 503 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 JAM2P57087 298 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 POU5F1Q01860 360 aaKnown RBP6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 EPHA7Q15375 998 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 MORC4Q8TE76 937 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 STAMQ92783 540 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 HSD17B14Q9BPX1 270 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 TSPYL2Q9H2G4 693 aaPredicted RBP6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 NDST4Q9H3R1 872 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 VCPKMTQ9H867 229 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 STX8Q9UNK0 236 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 REXO2Q9Y3B8 237 aaKnown RBP6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 JRKLQ9Y4A0 524 aa6.65□□□□□ -1.35
RAPGEF4-203ENST00000397087 FANCGO15287 622 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 STX17P56962 302 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 HERVK_113P62684 666 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 ARHGAP4P98171 946 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 APBA1Q02410 837 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 ICA1Q05084 483 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 DMTNQ08495 405 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 TSR1Q2NL82 804 aaKnown RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 SYT10Q6XYQ8 523 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 IFNL1Q8IU54 200 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 GRAMD1CQ8IYS0 662 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 SLC44A5Q8NCS7 719 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 FAM212AQ96EL1 285 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 TRIM47Q96LD4 638 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 GANQ9H2C0 597 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 STK32BQ9NY57 414 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 PCDHA12Q9UN75 941 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 PCDHGC5Q9Y5F6 944 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 SBF1O95248 1867 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 OPLAHO14841 1288 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 POLR3GO15318 223 aaPredicted RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 ERLIN1O75477 346 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 URI1O94763 535 aaPredicted RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 MTA2O94776 668 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 ICAM1P05362 532 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 MMP10P09238 476 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 VEGFAP15692 232 aaPredicted RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 TCP1P17987 556 aaKnown RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 RPL13P26373 211 aaKnown RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 GTF2H1P32780 548 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 AFMP43652 599 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 UBXN1Q04323 297 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 IFI16Q16666 785 aaKnown RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 PCNX4Q63HM2 1172 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 JAKMIP2Q96AA8 810 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 IWS1Q96ST2 819 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 MRPL44Q9H9J2 332 aaKnown RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 KIAA1217Q5T5P2 1943 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 DKC1O60832 514 aaKnown RBP eCLIP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 SPATA31C1P0DKV0 1188 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 PPP2R5EQ16537 467 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 FAM26FQ5R3K3 315 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 MREGQ8N565 214 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 SNX29Q8TEQ0 813 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 CDK5RAP3Q96JB5 506 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 TMOD2Q9NZR1 351 aa6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 SAP30BPQ9UHR5 308 aaKnown RBP6.64□□□□□ -1.35
RAPGEF4-203ENST00000397087 TTC26A0AVF1 554 aa6.63□□□□□ -1.35
RAPGEF4-203ENST00000397087 MEIS1O00470 390 aa6.63□□□□□ -1.35
RAPGEF4-203ENST00000397087 MAP3K13O43283 966 aa6.63□□□□□ -1.35
RAPGEF4-203ENST00000397087 TNNI2P48788 182 aa6.63□□□□□ -1.35
RAPGEF4-203ENST00000397087 GIT2Q14161 759 aa6.63□□□□□ -1.35
RAPGEF4-203ENST00000397087 LETM2Q2VYF4 491 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms