RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 AMNQ9BXJ7 453 aa17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 CEP170BQ9Y4F5 1589 aaPredicted RBP17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 SASH3O75995 380 aa17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 PALM2Q8IXS6 379 aa17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 CELF1Q92879 486 aaKnown RBP17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 L1RE1Q9UN81 338 aa17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
ATP2A3-205ENST00000397041 LRRIQ3A6PVS8 624 aaPredicted RBP17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 TDP2O95551 362 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 ATP6V1G3Q96LB4 118 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 RAB3IPQ96QF0 476 aaPredicted RBP17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 CNOT10Q9H9A5 744 aaKnown RBP17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 SH3GLB2Q9NR46 395 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 AMACRQ9UHK6 382 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 SERPINB13Q9UIV8 391 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 TOB1P50616 345 aaPredicted RBP17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 LRRC8CQ8TDW0 803 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 MAP3K14Q99558 947 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 RBM12Q9NTZ6 932 aaKnown RBP17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L15C9J2P7 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L13C9JLJ4 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L11C9JVI0 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L18D6R9N7 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L22D6RA61 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L17D6RBQ6 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L19D6RCP7 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L20D6RJB6 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 ECEL1O95672 775 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L24Q0WX57 530 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 USP17L6PQ6QN14 398 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 MSANTD4Q8NCY6 345 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 VCXQ9H320 206 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 VIPAS39Q9H9C1 493 aa17.16■□□□□ 0.34
ATP2A3-205ENST00000397041 SRGNP10124 158 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 GCFC2P16383 781 aaKnown RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 COASYQ13057 564 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 MUM1L1Q5H9M0 696 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 CCDC110Q8TBZ0 833 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 PIGOQ8TEQ8 1089 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 BSDC1Q9NW68 430 aaPredicted RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 SRP68Q9UHB9 627 aaKnown RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 ITIH6Q6UXX5 1313 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 CCDC188H7C350 402 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 DAPK3O43293 454 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 BAG2O95816 211 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 SEC24CP53992 1094 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 ARMC9Q7Z3E5 817 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 FBXL5Q9UKA1 691 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 POTEB3A0JP26 581 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 POTECB2RU33 542 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 POTEBQ6S5H4 581 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 OR2W6PQ8NHA6 318 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 GRK7Q8WTQ7 553 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 TAF1DQ9H5J8 278 aaPredicted RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 TESPA1A2RU30 521 aaPredicted RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 I3L4J1 428 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 PPP1R37O75864 691 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 TMED2Q15363 201 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 PSD3Q9NYI0 1048 aa17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
ATP2A3-205ENST00000397041 PLEKP08567 350 aaPredicted RBP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 CARSP49589 748 aaKnown RBP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 PPP2R5DQ14738 602 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 C1orf112Q9NSG2 853 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 TYW1Q9NV66 732 aaKnown RBP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 EIF3HO15372 352 aaKnown RBP eCLIP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 POLR2MP0CAP2 368 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 IL9RQ01113 521 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 CTTNQ14247 550 aaKnown RBP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 C10orf76Q5T2E6 689 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 BSPRYQ5W0U4 402 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 SDCCAG8Q86SQ7 713 aaPredicted RBP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 PVALEFA0A1B0GWK0 134 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 KRT19P08727 400 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 MAPK4P31152 587 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 NSFP46459 744 aaKnown RBP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 SFR1Q86XK3 245 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 RAD54LQ92698 747 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 DNAI2Q9GZS0 605 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 TMEM60Q9H2L4 133 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 SH2D4AQ9H788 454 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 PSMD14O00487 310 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 GDF11O95390 407 aa17.14■□□□□ 0.33
ATP2A3-205ENST00000397041 RASA3Q14644 834 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms