RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 CAPNS2Q96L46 248 aa15.23■□□□□ 0.03
MCF2L-209ENST00000397036 TCEAL9Q9UHQ7 104 aa15.23■□□□□ 0.03
MCF2L-209ENST00000397036 KIAA1024Q9UPX6 916 aa15.23■□□□□ 0.03
MCF2L-209ENST00000397036 DNM3Q9UQ16 869 aa15.23■□□□□ 0.03
MCF2L-209ENST00000397036 WDR64B1ANS9 1081 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 MRE11P49959 708 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 CRHR2Q13324 411 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 MORC3Q14149 939 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 NEDD9Q14511 834 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 MIER3Q7Z3K6 550 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 ZIC5Q96T25 663 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 TRIM9Q9C026 710 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 RMND1Q9NWS8 449 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 LCTP09848 1927 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 PVALEFA0A1B0GWK0 134 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 POTEB3A0JP26 581 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 EYA4O95677 639 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 UVSSAQ2YD98 709 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 POTEBQ6S5H4 581 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 KCNK18Q7Z418 384 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 GRAMD1CQ8IYS0 662 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-209ENST00000397036 MLKLQ8NB16 471 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 FAM200AQ8TCP9 573 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 USP6NLQ92738 828 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 ERCC4Q92889 916 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-209ENST00000397036 NACC1Q96RE7 527 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 UIMC1Q96RL1 719 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 PLIN2Q99541 437 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 BPIFA3Q9BQP9 254 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 NAT10Q9H0A0 1025 aaKnown RBP15.22■□□□□ 0.03
MCF2L-209ENST00000397036 RBSNQ9H1K0 784 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 ZSWIM4Q9H7M6 989 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-209ENST00000397036 MAN1B1Q9UKM7 699 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 PCDHA10Q9Y5I2 948 aa15.22■□□□□ 0.03
MCF2L-209ENST00000397036 RBM47A0AV96 593 aaKnown RBP15.21■□□□□ 0.03
MCF2L-209ENST00000397036 DKC1O60832 514 aaKnown RBP eCLIP15.21■□□□□ 0.03
MCF2L-209ENST00000397036 ATG7O95352 703 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 PLA2G4BP0C869 781 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 MAP2K5Q13163 448 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 CUL4BQ13620 913 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 MCM6Q14566 821 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 L1TD1Q5T7N2 865 aaKnown RBP15.21■□□□□ 0.03
MCF2L-209ENST00000397036 CCDC62Q6P9F0 684 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 DPP9Q86TI2 863 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 C4orf19Q8IY42 314 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 DYDC2Q96IM9 177 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 JPH1Q9HDC5 661 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-209ENST00000397036 RGL1Q9NZL6 768 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
MCF2L-209ENST00000397036 SYNGAP1Q96PV0 1343 aa15.21■□□□□ 0.02
MCF2L-209ENST00000397036 KLRC4O43908 158 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 RHOBTB3O94955 611 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 CCNE2O96020 404 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 RPN1P04843 607 aaKnown RBP15.2■□□□□ 0.02
MCF2L-209ENST00000397036 QARSP47897 775 aaKnown RBP15.2■□□□□ 0.02
MCF2L-209ENST00000397036 SLC12A3P55017 1021 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 SP2Q02086 613 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 ANO6Q4KMQ2 910 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 SEPT14Q6ZU15 432 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
MCF2L-209ENST00000397036 ARMCX2Q7L311 632 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 SOCS4Q8WXH5 440 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 MAML3Q96JK9 1138 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 GRPEL1Q9HAV7 217 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 KCND2Q9NZV8 630 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 DDX41Q9UJV9 622 aaKnown RBP15.2■□□□□ 0.02
MCF2L-209ENST00000397036 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
MCF2L-209ENST00000397036 ZNFX1Q9P2E3 1918 aaKnown RBP15.2■□□□□ 0.02
MCF2L-209ENST00000397036 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 MYMKA6NI61 221 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 CHMP2AO43633 222 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 BMP6P22004 513 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 ZNF165P49910 485 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 PSMC5P62195 406 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 POTEGQ6S5H5 508 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 METTL7BQ6UX53 244 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 ABHD15Q6UXT9 468 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 TPH2Q8IWU9 490 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 SCFD2Q8WU76 684 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 STAMQ92783 540 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 CCDC47Q96A33 483 aaKnown RBP15.19■□□□□ 0.02
MCF2L-209ENST00000397036 DACH1Q9UI36 760 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 DBR1Q9UK59 544 aaKnown RBP15.19■□□□□ 0.02
MCF2L-209ENST00000397036 ZNF236Q9UL36 1845 aa15.19■□□□□ 0.02
MCF2L-209ENST00000397036 E9PMD0 336 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 IGHA2P01877 340 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 PSAPP07602 524 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 UBA1P22314 1058 aaKnown RBP15.18■□□□□ 0.02
MCF2L-209ENST00000397036 CYP4A11Q02928 519 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 CTTNQ14247 550 aaKnown RBP15.18■□□□□ 0.02
MCF2L-209ENST00000397036 TTLL4Q14679 1199 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 COBLL1Q53SF7 1204 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 UNC13DQ70J99 1090 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 DNAJC19Q96DA6 116 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 LXNQ9BS40 222 aa15.18■□□□□ 0.02
MCF2L-209ENST00000397036 TINF2Q9BSI4 451 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms