RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 TRIM48Q8IWZ4 208 aa6.04□□□□□ -1.44
CMC1-202ENST00000396610 TOE1Q96GM8 510 aaKnown RBP6.04□□□□□ -1.44
CMC1-202ENST00000396610 GORASP1Q9BQQ3 440 aa6.04□□□□□ -1.44
CMC1-202ENST00000396610 INTS7Q9NVH2 962 aaKnown RBP6.04□□□□□ -1.44
CMC1-202ENST00000396610 RBPJLQ9UBG7 517 aa6.04□□□□□ -1.44
CMC1-202ENST00000396610 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
CMC1-202ENST00000396610 ATP23Q9Y6H3 246 aa6.04□□□□□ -1.44
CMC1-202ENST00000396610 PMF1-BGLAPU3KQ54 211 aa6.04□□□□□ -1.44
CMC1-202ENST00000396610 NUAK1O60285 661 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 PTPN1P18031 435 aaKnown RBP6.03□□□□□ -1.44
CMC1-202ENST00000396610 LACTBP83111 547 aaPredicted RBP6.03□□□□□ -1.44
CMC1-202ENST00000396610 PAN2Q504Q3 1202 aaKnown RBP6.03□□□□□ -1.44
CMC1-202ENST00000396610 TM4SF20Q53R12 229 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 CPZQ66K79 652 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 CNNM4Q6P4Q7 775 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 CNKSR3Q6P9H4 555 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 HHIPL2Q6UWX4 724 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 LRRTM3Q86VH5 581 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 NOSTRINQ8IVI9 506 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 PWWP2AQ96N64 755 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 TARS2Q9BW92 718 aaKnown RBP6.03□□□□□ -1.44
CMC1-202ENST00000396610 RIC8BQ9NVN3 520 aa6.03□□□□□ -1.44
CMC1-202ENST00000396610 FAM90A27PA6NNH2 459 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 ACOT7O00154 380 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 NPTXRO95502 500 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 FAHP16930 419 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 MECP2P51608 486 aaKnown RBP6.02□□□□□ -1.45
CMC1-202ENST00000396610 GYS2P54840 703 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 ITGA1P56199 1179 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 NKX3-2P78367 333 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 HTRA3P83110 453 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 SEC23AQ15436 765 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 CDCA2Q69YH5 1023 aaPredicted RBP6.02□□□□□ -1.45
CMC1-202ENST00000396610 TMC5Q6UXY8 1006 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 STK32CQ86UX6 486 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 PROSER1Q86XN7 944 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 NLGN4XQ8N0W4 816 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 C2orf69Q8N8R5 385 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 CHST14Q8NCH0 376 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 FNIP1Q8TF40 1166 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 ZSWIM3Q96MP5 696 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 WASF3Q9UPY6 502 aa6.02□□□□□ -1.45
CMC1-202ENST00000396610 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.01□□□□□ -1.45
CMC1-202ENST00000396610 SLC12A8A0AV02 714 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 CBX4O00257 560 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 SCDO00767 359 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 KRT37O76014 449 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 FLT3P36888 993 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 SMAD4Q13485 552 aaKnown RBP6.01□□□□□ -1.45
CMC1-202ENST00000396610 CFAP100Q494V2 611 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 VWA3BQ502W6 1294 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 ZNF385BQ569K4 471 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 BTBD8Q5XKL5 378 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 LIPIQ6XZB0 460 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 EP400NLQ6ZTU2 488 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 C1QL4Q86Z23 238 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 LRRC56Q8IYG6 542 aaPredicted RBP6.01□□□□□ -1.45
CMC1-202ENST00000396610 DACT3Q96B18 629 aaPredicted RBP6.01□□□□□ -1.45
CMC1-202ENST00000396610 ZBTB8AQ96BR9 441 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 PDGFDQ9GZP0 370 aaPredicted RBP6.01□□□□□ -1.45
CMC1-202ENST00000396610 IRF2BPLQ9H1B7 796 aa6.01□□□□□ -1.45
CMC1-202ENST00000396610 PRAMEF25A6NGN4 478 aa6□□□□□ -1.45
CMC1-202ENST00000396610 GSG1L2A8MUP6 293 aa6□□□□□ -1.45
CMC1-202ENST00000396610 CLASP2O75122 1294 aaKnown RBP6□□□□□ -1.45
CMC1-202ENST00000396610 CFPP27918 469 aa6□□□□□ -1.45
CMC1-202ENST00000396610 GJA4P35212 333 aa6□□□□□ -1.45
CMC1-202ENST00000396610 THBS2P35442 1172 aa6□□□□□ -1.45
CMC1-202ENST00000396610 AFF3P51826 1226 aaKnown RBP6□□□□□ -1.45
CMC1-202ENST00000396610 NEK4P51957 841 aa6□□□□□ -1.45
CMC1-202ENST00000396610 IRF9Q00978 393 aa6□□□□□ -1.45
CMC1-202ENST00000396610 ADAM9Q13443 819 aa6□□□□□ -1.45
CMC1-202ENST00000396610 SKOR2Q2VWA4 1001 aaPredicted RBP6□□□□□ -1.45
CMC1-202ENST00000396610 TAF7LQ5H9L4 462 aa6□□□□□ -1.45
CMC1-202ENST00000396610 LCE4AQ5TA78 99 aa6□□□□□ -1.45
CMC1-202ENST00000396610 CD276Q5ZPR3 534 aa6□□□□□ -1.45
CMC1-202ENST00000396610 CIAPIN1Q6FI81 312 aa6□□□□□ -1.45
CMC1-202ENST00000396610 PKN3Q6P5Z2 889 aa6□□□□□ -1.45
CMC1-202ENST00000396610 UBE2R2Q712K3 238 aaPredicted RBP6□□□□□ -1.45
CMC1-202ENST00000396610 TOX2Q96NM4 488 aa6□□□□□ -1.45
CMC1-202ENST00000396610 C11orf84Q9BUA3 381 aaPredicted RBP6□□□□□ -1.45
CMC1-202ENST00000396610 BOCQ9BWV1 1114 aa6□□□□□ -1.45
CMC1-202ENST00000396610 SLKQ9H2G2 1235 aaPredicted RBP6□□□□□ -1.45
CMC1-202ENST00000396610 CABP5Q9NP86 173 aa6□□□□□ -1.45
CMC1-202ENST00000396610 NGRNQ9NPE2 291 aaKnown RBP6□□□□□ -1.45
CMC1-202ENST00000396610 A0A087X0B3 334 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 PTPDC1A2A3K4 754 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 ZNF891A8MT65 544 aaPredicted RBP5.99□□□□□ -1.45
CMC1-202ENST00000396610 TRAF5O00463 557 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 PDE8AO60658 829 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 C4BPAP04003 597 aaKnown RBP5.99□□□□□ -1.45
CMC1-202ENST00000396610 MYCLP1P12525 358 aaPredicted RBP5.99□□□□□ -1.45
CMC1-202ENST00000396610 POU3F2P20265 443 aaPredicted RBP5.99□□□□□ -1.45
CMC1-202ENST00000396610 DLX2Q07687 328 aaPredicted RBP5.99□□□□□ -1.45
CMC1-202ENST00000396610 PCBP1Q15365 356 aaKnown RBP eCLIP5.99□□□□□ -1.45
CMC1-202ENST00000396610 SEPT7Q16181 437 aaKnown RBP5.99□□□□□ -1.45
CMC1-202ENST00000396610 EGFLAMQ63HQ2 1017 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 VASNQ6EMK4 673 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 OTOP1Q7RTM1 612 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 PPM1KQ8N3J5 372 aa5.99□□□□□ -1.45
CMC1-202ENST00000396610 LINC00482Q8N8I6 264 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms