RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PLA2G4BP0C869 781 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 AMPD3Q01432 767 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 SP2Q02086 613 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 COBLL1Q53SF7 1204 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 NLRX1Q86UT6 975 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 AOPEPQ8N6M6 819 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 SYT2Q8N9I0 419 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-204ENST00000396548 GIMAP8Q8ND71 665 aaPredicted RBP14.23□□□□□ -0.13
TRIM39-204ENST00000396548 PARK7Q99497 189 aaKnown RBP14.23□□□□□ -0.13
TRIM39-204ENST00000396548 BCAS3Q9H6U6 928 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 RMND1Q9NWS8 449 aa14.23□□□□□ -0.13
TRIM39-204ENST00000396548 STXBP2Q15833 593 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 ARID2Q68CP9 1835 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 PVALEFA0A1B0GWK0 134 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 PGK2P07205 417 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 ERCC5P28715 1186 aaPredicted RBP14.22□□□□□ -0.13
TRIM39-204ENST00000396548 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
TRIM39-204ENST00000396548 ZNF792Q3KQV3 632 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 ABRAQ8N0Z2 381 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 NEK9Q8TD19 979 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 CHMP2AO43633 222 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 CYP11B2P19099 503 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 CTTNQ14247 550 aaKnown RBP14.22□□□□□ -0.13
TRIM39-204ENST00000396548 FAM110CQ1W6H9 321 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 SMYD4Q8IYR2 804 aaPredicted RBP14.22□□□□□ -0.13
TRIM39-204ENST00000396548 SMCR8Q8TEV9 937 aaPredicted RBP14.22□□□□□ -0.13
TRIM39-204ENST00000396548 DDX12PQ92771 950 aa14.22□□□□□ -0.13
TRIM39-204ENST00000396548 ADD3Q9UEY8 706 aaKnown RBP14.22□□□□□ -0.13
TRIM39-204ENST00000396548 EYA4O95677 639 aa14.21□□□□□ -0.13
TRIM39-204ENST00000396548 FCER1AP12319 257 aa14.21□□□□□ -0.13
TRIM39-204ENST00000396548 SARM1Q6SZW1 724 aa14.21□□□□□ -0.13
TRIM39-204ENST00000396548 UNC13DQ70J99 1090 aa14.21□□□□□ -0.13
TRIM39-204ENST00000396548 TELO2Q9Y4R8 837 aa14.21□□□□□ -0.13
TRIM39-204ENST00000396548 MCM3APO60318 1980 aa14.21□□□□□ -0.13
TRIM39-204ENST00000396548 LYPLA2O95372 231 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 CYP4A11Q02928 519 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 ZNF746Q6NUN9 644 aaPredicted RBP14.21□□□□□ -0.14
TRIM39-204ENST00000396548 IFNL1Q8IU54 200 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 CDHR1Q96JP9 859 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 LRRC27Q9C0I9 530 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 PKD2L1Q9P0L9 805 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 GDAQ9Y2T3 454 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 PCDHA2Q9Y5H9 948 aa14.21□□□□□ -0.14
TRIM39-204ENST00000396548 CCNA1P78396 465 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 ADSSL1Q8N142 457 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 RDM1Q8NG50 284 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 ENOX1Q8TC92 643 aaKnown RBP14.2□□□□□ -0.14
TRIM39-204ENST00000396548 DNM3Q9UQ16 869 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 DDX39AO00148 427 aaKnown RBP14.2□□□□□ -0.14
TRIM39-204ENST00000396548 ZBTB39O15060 712 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 COBLO75128 1261 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 KRT76Q01546 638 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 KCTD2Q14681 263 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 DACH1Q9UI36 760 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 ATG7O95352 703 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 PRCPP42785 496 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 INHBEP58166 350 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 GRB14Q14449 540 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 MIER3Q7Z3K6 550 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 KIAA0895Q8NCT3 520 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 LXNQ9BS40 222 aa14.2□□□□□ -0.14
TRIM39-204ENST00000396548 TMEM88BA6NKF7 163 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 STBD1O95210 358 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 P4HBP07237 508 aaKnown RBP14.19□□□□□ -0.14
TRIM39-204ENST00000396548 SFNP31947 248 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 TM4SF4P48230 202 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 JAK3P52333 1124 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 MYL5Q02045 173 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 UGCGQ16739 394 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 GNPTABQ3T906 1256 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 MGAMO43451 1857 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 NPHP3-ACAD11A0A0J9YXS1 232 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 SMTNL1A8MU46 457 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 STRNO43815 780 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 ZNF18P17022 549 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 ASIC1P78348 528 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 CCDC173Q0VFZ6 552 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 STK4Q13043 487 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 GIT2Q14161 759 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
TRIM39-204ENST00000396548 TPH2Q8IWU9 490 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 BANK1Q8NDB2 785 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
TRIM39-204ENST00000396548 TOMM70O94826 608 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 C17orf99Q6UX52 265 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 ABHD15Q6UXT9 468 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 C1orf186Q6ZWK4 172 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 DYMQ7RTS9 669 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 GPR142Q7Z601 462 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 ZNF467Q7Z7K2 595 aaPredicted RBP14.18□□□□□ -0.14
TRIM39-204ENST00000396548 GPBP1Q86WP2 473 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 WDR64B1ANS9 1081 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 ADORA2AP29274 412 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 PDE4DQ08499 809 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 SMAP1Q8IYB5 467 aaPredicted RBP14.18□□□□□ -0.14
TRIM39-204ENST00000396548 PIGOQ8TEQ8 1089 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 NACC1Q96RE7 527 aa14.18□□□□□ -0.14
TRIM39-204ENST00000396548 RUSC1Q9BVN2 902 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms