RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 CCDC40Q4G0X9 1142 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 KRT79Q5XKE5 535 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 GUF1Q8N442 669 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 MTMR8Q96EF0 704 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 NOX5Q96PH1 765 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 TSG101Q99816 390 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 NUDT12Q9BQG2 462 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 TNNI2P48788 182 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 TEKT1Q969V4 418 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 RBM12Q9NTZ6 932 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 TBC1D7Q9P0N9 293 aa15.47■□□□□ 0.07
CCHCR1-203ENST00000396268 PVALEFA0A1B0GWK0 134 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 TRAF5O00463 557 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 EIF6P56537 245 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 STRIP1Q5VSL9 837 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 HAUS3Q68CZ6 603 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 KCNV1Q6PIU1 500 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 SLF2Q8IX21 1173 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 JPH2Q9BR39 696 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 RAB34Q9BZG1 259 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 YY1AP1Q9H869 796 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 KANSL2Q9H9L4 492 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 STK17AQ9UEE5 414 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 SHTN1A0MZ66 631 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 HSF2BPO75031 334 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 PRLRP16471 622 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 EPHB4P54760 987 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 RNASE9P60153 205 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 LRRC63Q05C16 580 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 KCNK18Q7Z418 384 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 BAP1Q92560 729 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 GJA10Q969M2 543 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 TLR10Q9BXR5 811 aa15.46■□□□□ 0.07
CCHCR1-203ENST00000396268 ROBO3Q96MS0 1386 aa15.46■□□□□ 0.06
CCHCR1-203ENST00000396268 NDUFAB1O14561 156 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 RNF187Q5TA31 235 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 PDXDC1Q6P996 788 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 TSEN2Q8NCE0 465 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 IFT81Q8WYA0 676 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 ESYT3A0FGR9 886 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 OPA1O60313 960 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 PLCG2P16885 1265 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 NT5C2P49902 561 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 PPFIA1Q13136 1202 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 COBLL1Q53SF7 1204 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 C16orf86Q6ZW13 317 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 NEDD1Q8NHV4 660 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 RAD54LQ92698 747 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 MTMR9Q96QG7 549 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 ZNF646O15015 1829 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 ADCY7P51828 1080 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 APBA1Q02410 837 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 SF3A3Q12874 501 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■■□□□ 13.6
CCHCR1-203ENST00000396268 SLC9C1Q4G0N8 1177 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 CFAP221Q4G0U5 840 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 LRRC55Q6ZSA7 311 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 NELFCDQ8IXH7 590 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 MYOCDQ8IZQ8 938 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 SCAF8Q9UPN6 1271 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-203ENST00000396268 GOLGA8KD6RF30 607 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 LCA5LO95447 670 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 FTCDO95954 541 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 KRT14P02533 472 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 POLR2FP61218 127 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 ITIH3Q06033 890 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 KLHDC7AQ5VTJ3 777 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 LARGE2Q8N3Y3 721 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 SLC16A10Q8TF71 515 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 TDRD3Q9H7E2 651 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 GPCPD1Q9NPB8 672 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 SFMBT2Q5VUG0 894 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 EMBQ6PCB8 327 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 LSM14BQ9BX40 385 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 CD248Q9HCU0 757 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 PACSIN2Q9UNF0 486 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 SUGT1Q9Y2Z0 365 aa15.44■□□□□ 0.06
CCHCR1-203ENST00000396268 ZSCAN5CA6NGD5 496 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 ECM2O94769 699 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 MAP2K2P36507 400 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.066e-7■□□□□ 9.4
CCHCR1-203ENST00000396268 KCNMA1Q12791 1236 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 RAPGEF1Q13905 1077 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 UBE2SQ16763 222 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 FAM83BQ5T0W9 1011 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 HHIPL2Q6UWX4 724 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 PRMT6Q96LA8 375 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 NFU1Q9UMS0 254 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 COL4A3BPQ9Y5P4 624 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 DDTLA6NHG4 134 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 SHOX2O60902 331 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 PALMO75781 387 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 AKR1B1P15121 316 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 FKBP3Q00688 224 aaKnown RBP15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 GUCY2DQ02846 1103 aa15.43■□□□□ 0.06
CCHCR1-203ENST00000396268 HGSNATQ68CP4 663 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms