RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 FGFBP2Q9BYJ0 223 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 TMX4Q9H1E5 349 aaPredicted RBP17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 SALL4Q9UJQ4 1053 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 RNF40O75150 1001 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 ZMYND10O75800 440 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 PRPF6O94906 941 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 SERPING1P05155 500 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 ERCC3P19447 782 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 FAM83BQ5T0W9 1011 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 AENQ8WTP8 325 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 C7orf43Q8WVR3 580 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 MKL1Q969V6 931 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 NOX5Q96PH1 765 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 KCTD10Q9H3F6 313 aa17.62■□□□□ 0.41
CCHCR1-202ENST00000396263 SIPA1L1O43166 1804 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 POTEB3A0JP26 581 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 POTECB2RU33 542 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L15C9J2P7 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L13C9JLJ4 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L11C9JVI0 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L18D6R9N7 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L22D6RA61 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L17D6RBQ6 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L19D6RCP7 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L20D6RJB6 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 SSBP05455 408 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 CYP11B2P19099 503 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L24Q0WX57 530 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 QRICH1Q2TAL8 776 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 SFMBT2Q5VUG0 894 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 NFRKBQ6P4R8 1299 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 POTEBQ6S5H4 581 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 GPBP1Q86WP2 473 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 SCFD1Q8WVM8 642 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 TEKT1Q969V4 418 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 DRC1Q96MC2 740 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 FAM184BQ9ULE4 1060 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 PITPNM2Q9BZ72 1349 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 UTRNP46939 3433 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 SCN9AQ15858 1988 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 TLR2O60603 784 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 PHACTR2O75167 634 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 ZBTB7AO95365 584 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 GUCY2CP25092 1073 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 SLC1A4P43007 532 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 TDRD12Q587J7 1177 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 LEKR1Q6ZMV7 388 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 DCAF4Q8WV16 495 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 MXD3Q9BW11 206 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 ANO3Q9BYT9 981 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 FAM204AQ9H8W3 233 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 TSKSQ9UJT2 592 aa17.61■□□□□ 0.41
CCHCR1-202ENST00000396263 ZNF646O15015 1829 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 SCNN1DP51172 638 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 RASSF7Q02833 373 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 HERC4Q5GLZ8 1057 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 SLFN12Q8IYM2 578 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 GOLGA6L1Q8N7Z2 621 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 LSM14BQ9BX40 385 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 TLR10Q9BXR5 811 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 NLRC4Q9NPP4 1024 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 TBC1D7Q9P0N9 293 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 SLC12A3P55017 1021 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 NFIAQ12857 509 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 AP3B2Q13367 1082 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 EDRF1Q3B7T1 1238 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 TTC31Q49AM3 519 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 KLHDC7AQ5VTJ3 777 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 GSPT2Q8IYD1 628 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 CRYGNQ8WXF5 182 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 CRACR2AQ9BSW2 395 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 LRRC1Q9BTT6 524 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 DNAJC18Q9H819 358 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 LUC7LQ9NQ29 371 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 EMILIN3Q9NT22 766 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 PCDHA1Q9Y5I3 950 aa17.6■□□□□ 0.41
CCHCR1-202ENST00000396263 MAGEA9P43362 315 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 NELFCDQ8IXH7 590 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 DBNDD1Q9H9R9 158 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 NYAP2Q9P242 653 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 NPHP3-ACAD11A0A0J9YXS1 232 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 ANKRD65E5RJM6 399 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 MED24O75448 989 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 CDC37Q16543 378 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 ARSHQ5FYA8 562 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 CCDC181Q5TID7 509 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 HAUS3Q68CZ6 603 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 RNF14Q9UBS8 474 aa17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 DMGDHQ9UI17 866 aaKnown RBP17.59■□□□□ 0.41
CCHCR1-202ENST00000396263 MEIS2O14770 477 aa17.58■□□□□ 0.41
CCHCR1-202ENST00000396263 IVLP07476 585 aa17.58■□□□□ 0.41
CCHCR1-202ENST00000396263 PAFAH1B1P43034 410 aa17.58■□□□□ 0.41
CCHCR1-202ENST00000396263 POLR2FP61218 127 aaKnown RBP17.58■□□□□ 0.41
CCHCR1-202ENST00000396263 SPIRE1Q08AE8 756 aa17.58■□□□□ 0.41
CCHCR1-202ENST00000396263 MCTP2Q6DN12 878 aa17.58■□□□□ 0.41
CCHCR1-202ENST00000396263 GPIHBP1Q8IV16 184 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms