RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GTF3C2Q8WUA4 911 aaPredicted RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 CLEC4DQ8WXI8 215 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 RAD54LQ92698 747 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 SYN2Q92777 582 aaPredicted RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 DHX58Q96C10 678 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 MXD3Q9BW11 206 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 TRIM9Q9C026 710 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 TTYH3Q9C0H2 523 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 TMEM60Q9H2L4 133 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 EHMT1Q9H9B1 1298 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 A1CFQ9NQ94 594 aaKnown RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 INTS13Q9NVM9 706 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 SAP30BPQ9UHR5 308 aaKnown RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 DBR1Q9UK59 544 aaKnown RBP5.95□□□□□ -1.46
VPS41-203ENST00000395969 MYO6Q9UM54 1294 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 UBIAD1Q9Y5Z9 338 aa5.95□□□□□ -1.46
VPS41-203ENST00000395969 FAM205CA6NFA0 338 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 MEIS1O00470 390 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 EIF3DO15371 548 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS41-203ENST00000395969 POLR2DO15514 142 aaKnown RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 C21orf2O43822 256 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SHOX2O60902 331 aaPredicted RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 PSMD10O75832 226 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 ICAM3P32942 547 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 AARSP49588 968 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS41-203ENST00000395969 NUBP1P53384 320 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 NAPAP54920 295 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 RTP1P59025 263 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SATB1Q01826 763 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 CDC37Q16543 378 aaPredicted RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 KIF4BQ2VIQ3 1234 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 EDRF1Q3B7T1 1238 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 PCNX4Q63HM2 1172 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 ISM2Q6H9L7 571 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 KCNV1Q6PIU1 500 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 OLFM4Q6UX06 510 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 KRT26Q7Z3Y9 468 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 RNF217Q8TC41 542 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 LRRC15Q8TF66 581 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 DNAJC19Q96DA6 116 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 CEP63Q96MT8 703 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 CLIC6Q96NY7 704 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 PNKPQ96T60 521 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 RABEP2Q9H5N1 569 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 OLFML3Q9NRN5 406 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 TBC1D7Q9P0N9 293 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SEL1LQ9UBV2 794 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 PRR12Q9ULL5 1215 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 MRPL11Q9Y3B7 192 aaKnown RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 PLXNA1Q9UIW2 1896 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 BICDL2A1A5D9 508 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 RIMBP2O15034 1052 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 PRPF6O94906 941 aaKnown RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 RPN1P04843 607 aaKnown RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 STAT2P52630 851 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SLC12A3P55017 1021 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 CHMP4BP1P59074 171 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 GNG11P61952 73 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 GUCY1B3Q02153 619 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 MEA1Q16626 185 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 MCF2L2Q86YR7 1114 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SLC9A9Q8IVB4 645 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SCYL3Q8IZE3 742 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 OGFOD1Q8N543 542 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SLC17A8Q8NDX2 589 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 TBCKQ8TEA7 893 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 ERCC4Q92889 916 aaPredicted RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 EP400Q96L91 3159 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 ERGIC2Q96RQ1 377 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 HSD17B14Q9BPX1 270 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 ZNF341Q9BYN7 854 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 PSTPIP2Q9H939 334 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 GPRC5DQ9NZD1 345 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS41-203ENST00000395969 KCNH4Q9UQ05 1017 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 PLXNB2O15031 1838 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 STX10O60499 249 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 PHACTR2O75167 634 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 ERLIN1O75477 346 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 HNRNPH1P31943 449 aaKnown RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 TAGLNQ01995 201 aaKnown RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 ALCAMQ13740 583 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 TUBB2AQ13885 445 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 CASP8Q14790 479 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 SYT2Q8N9I0 419 aaPredicted RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 RBM46Q8TBY0 533 aaKnown RBP5.94□□□□□ -1.46
VPS41-203ENST00000395969 HVCN1Q96D96 273 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 TUBB2BQ9BVA1 445 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 ANO3Q9BYT9 981 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 VIPAS39Q9H9C1 493 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS41-203ENST00000395969 ABCB6Q9NP58 842 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 TRAF3IP3Q9Y228 551 aa5.94□□□□□ -1.46
VPS41-203ENST00000395969 GTPBP10A4D1E9 387 aaKnown RBP5.93□□□□□ -1.46
VPS41-203ENST00000395969 GNA14O95837 355 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 IGHA2P01877 340 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 TCF3P15923 654 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 LMNB1P20700 586 aa5.93□□□□□ -1.46
VPS41-203ENST00000395969 MNAT1P51948 309 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms