RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 CFAP73A6NFT4 308 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 PPIP5K2O43314 1243 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 SLC26A4O43511 780 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 PRC1O43663 620 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 RFC5P40937 340 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 KARSQ15046 597 aaKnown RBP9.71□□□□□ -0.85
MSH5-205ENST00000395853 ZNF362Q5T0B9 420 aaPredicted RBP9.71□□□□□ -0.85
MSH5-205ENST00000395853 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 MASTLQ96GX5 879 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 CTAGE1Q96RT6 745 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 CCT7Q99832 543 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 RPAP3Q9H6T3 665 aaPredicted RBP9.71□□□□□ -0.85
MSH5-205ENST00000395853 DLGAP2Q9P1A6 1054 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 KIAA1468Q9P260 1216 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 SNX14Q9Y5W7 946 aa9.71□□□□□ -0.85
MSH5-205ENST00000395853 TRIM64CA6NLI5 447 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 TBKBP1A7MCY6 615 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 ACTN4O43707 911 aaKnown RBP9.71□□□□□ -0.86
MSH5-205ENST00000395853 DDNO94850 711 aaPredicted RBP9.71□□□□□ -0.86
MSH5-205ENST00000395853 FOSL1P15407 271 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 USP14P54578 494 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 GEMIN4P57678 1058 aaKnown RBP9.71□□□□□ -0.86
MSH5-205ENST00000395853 CNGA3Q16281 694 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 KCTD16Q68DU8 428 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 ADALQ6DHV7 355 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 DAAM2Q86T65 1068 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 SYT2Q8N9I0 419 aaPredicted RBP9.71□□□□□ -0.86
MSH5-205ENST00000395853 EDC3Q96F86 508 aaKnown RBP9.71□□□□□ -0.86
MSH5-205ENST00000395853 HIC2Q96JB3 615 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 RNPC3Q96LT9 517 aaKnown RBP9.71□□□□□ -0.86
MSH5-205ENST00000395853 FAM227BQ96M60 508 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 CEP295NLQ96MC4 621 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 FAM192AQ9GZU8 254 aa9.71□□□□□ -0.86
MSH5-205ENST00000395853 TAF1DQ9H5J8 278 aaPredicted RBP9.71□□□□□ -0.86
MSH5-205ENST00000395853 STX10O60499 249 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 PDHA1P08559 390 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 SRGNP10124 158 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 CDK17Q00537 523 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 TBC1D10BQ4KMP7 808 aaPredicted RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 OR52E8Q6IFG1 317 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 TMEM139Q8IV31 216 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 TTC39CQ8N584 583 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 ZNF280CQ8ND82 737 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 VPS37AQ8NEZ2 397 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 GDAP1Q8TB36 358 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.7□□□□□ -0.86
MSH5-205ENST00000395853 RNF25Q96BH1 459 aaPredicted RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 SEC62Q99442 399 aaKnown RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 PFDN4Q9NQP4 134 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 DBNLQ9UJU6 430 aaKnown RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 NDUFB9Q9Y6M9 179 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 ADAMTSL1Q8N6G6 1762 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 WDR46O15213 610 aaKnown RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 BIRC5O15392 142 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 TTI1O43156 1089 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 TBCAO75347 108 aaKnown RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 ITGBL1O95965 494 aaPredicted RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 GJB2P29033 226 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 NMIQ13287 307 aaPredicted RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 LRP8Q14114 963 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 IFI16Q16666 785 aaKnown RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 CCDC153Q494R4 210 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 TNNI3KQ59H18 835 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 TTMPQ5BVD1 217 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 GKAP1Q5VSY0 366 aaPredicted RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 DUS1LQ6P1R4 473 aaKnown RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 TOGARAM2Q6ZUX3 1019 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 C11orf74Q86VG3 221 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 CACNA2D3Q8IZS8 1091 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 ZNF713Q8N859 430 aaPredicted RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 CCT6BQ92526 530 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 C8orf76Q96K31 380 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 SETDB2Q96T68 719 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 SLF1Q9BQI6 1058 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 DRC3Q9H069 523 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 C6orf203Q9P0P8 240 aaPredicted RBP9.7□□□□□ -0.86
MSH5-205ENST00000395853 FPGT-TNNI3KV9GXZ4 949 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 SLX4Q8IY92 1834 aa9.7□□□□□ -0.86
MSH5-205ENST00000395853 POTEFA5A3E0 1075 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 CPA1P15085 419 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 VEGFBP49765 207 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 GPSM2P81274 684 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 CMPK2Q5EBM0 449 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 RUFY2Q8WXA3 655 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 ABTB1Q969K4 478 aaPredicted RBP9.69□□□□□ -0.86
MSH5-205ENST00000395853 ARL8AQ96BM9 186 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 ABCF3Q9NUQ8 709 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 LIMCH1Q9UPQ0 1083 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 LRRC42Q9Y546 428 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 HMGB1P1B2RPK0 211 aaPredicted RBP9.69□□□□□ -0.86
MSH5-205ENST00000395853 GSTA1P08263 222 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 MDH1P40925 334 aaKnown RBP9.69□□□□□ -0.86
MSH5-205ENST00000395853 SARSP49591 514 aaKnown RBP9.69□□□□□ -0.86
MSH5-205ENST00000395853 PDE1BQ01064 536 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 MCL1Q07820 350 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 BCL2A1Q16548 175 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 FOXB2Q5VYV0 432 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 NEPROQ6NW34 567 aa9.69□□□□□ -0.86
MSH5-205ENST00000395853 ANKRD13AQ8IZ07 590 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms