RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 NAPAP54920 295 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 EVCP57679 992 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 MTMR1Q13613 665 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 NTRK3Q16288 839 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 BRF1Q92994 677 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 MXRA8Q9BRK3 442 aa18.54■□□□□ 0.56
CXCL12-206ENST00000395795 SPTBN5Q9NRC6 3674 aaKnown RBP18.54■□□□□ 0.56
CXCL12-206ENST00000395795 ABHD14A-ACY1A0A1B0GW23 586 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 SPDYE3A6NKU9 549 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 RSPH10B2B2RC85 870 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 LGR5O75473 907 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 RSPH10BP0C881 870 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 POU3F3P20264 500 aaPredicted RBP18.53■□□□□ 0.56
CXCL12-206ENST00000395795 THPOP40225 353 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 ITGB3BPQ13352 177 aaPredicted RBP18.53■□□□□ 0.56
CXCL12-206ENST00000395795 PFKFB3Q16875 520 aaPredicted RBP18.53■□□□□ 0.56
CXCL12-206ENST00000395795 PLEKHG4Q58EX7 1191 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 MARCH8Q5T0T0 291 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.53■□□□□ 0.56
CXCL12-206ENST00000395795 GIMAP8Q8ND71 665 aaPredicted RBP18.53■□□□□ 0.56
CXCL12-206ENST00000395795 DBF4BQ8NFT6 615 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 CDHR1Q96JP9 859 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 GAS2L1Q99501 681 aaPredicted RBP18.53■□□□□ 0.56
CXCL12-206ENST00000395795 ANO3Q9BYT9 981 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 KCNH7Q9NS40 1196 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 PKD2L1Q9P0L9 805 aa18.53■□□□□ 0.56
CXCL12-206ENST00000395795 SMCO2A6NFE2 343 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 hCG_1984214I3L0E3 225 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 MEIS1O00470 390 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 MAFGO15525 162 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 EDIL3O43854 480 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 LPXNO60711 386 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 SREBF1P36956 1147 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 ADCY7P51828 1080 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 FAM26DQ5JW98 314 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 RUFY4Q6ZNE9 571 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 ZNF713Q8N859 430 aaPredicted RBP18.52■□□□□ 0.56
CXCL12-206ENST00000395795 SEPT1Q8WYJ6 367 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 CERS4Q9HA82 394 aa18.52■□□□□ 0.56
CXCL12-206ENST00000395795 PRRC2BQ5JSZ5 2229 aaKnown RBP18.51■□□□□ 0.55
CXCL12-206ENST00000395795 MBLAC1A4D2B0 266 aaPredicted RBP18.51■□□□□ 0.55
CXCL12-206ENST00000395795 CAND2O75155 1236 aa18.51■□□□□ 0.55
CXCL12-206ENST00000395795 GJB5O95377 273 aa18.51■□□□□ 0.55
CXCL12-206ENST00000395795 METAP2P50579 478 aaKnown RBP eCLIP18.51■□□□□ 0.55
CXCL12-206ENST00000395795 TOB2Q14106 344 aaPredicted RBP18.51■□□□□ 0.55
CXCL12-206ENST00000395795 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
CXCL12-206ENST00000395795 RPAINQ86UA6 219 aa18.51■□□□□ 0.55
CXCL12-206ENST00000395795 ZNF215Q9UL58 517 aaPredicted RBP18.51■□□□□ 0.55
CXCL12-206ENST00000395795 SIP14410 1827 aa18.51■□□□□ 0.55
CXCL12-206ENST00000395795 MICAL3Q7RTP6 2002 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 NFASCO94856 1347 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 EMSYQ7Z589 1322 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 NRCAMQ92823 1304 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 IGLV3-22A0A075B6J6 115 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 ESYT2A0FGR8 921 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 FAM86B1E9PN63 330 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 PRPF3O43395 683 aaKnown RBP18.5■□□□□ 0.55
CXCL12-206ENST00000395795 ATG7O95352 703 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 FOSP01100 380 aaPredicted RBP18.5■□□□□ 0.55
CXCL12-206ENST00000395795 CHRNA1P02708 482 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 CTSHP09668 335 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 FAM86B2P0C5J1 330 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 SCG2P13521 617 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 MGAT3Q09327 533 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 CEP55Q53EZ4 464 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 KRT40Q6A162 431 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 ZBTB10Q96DT7 871 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 ZMYND12Q9H0C1 365 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 AGO4Q9HCK5 861 aaKnown RBP18.5■□□□□ 0.55
CXCL12-206ENST00000395795 MTCH2Q9Y6C9 303 aa18.5■□□□□ 0.55
CXCL12-206ENST00000395795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-206ENST00000395795 DHX15O43143 795 aaKnown RBP18.49■□□□□ 0.55
CXCL12-206ENST00000395795 TLL1O43897 1013 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 CCNE2O96020 404 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 IGFBP4P22692 258 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 PDIA3P30101 505 aaKnown RBP18.49■□□□□ 0.55
CXCL12-206ENST00000395795 KCNJ6P48051 423 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 ARHGAP4P98171 946 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 AP3B2Q13367 1082 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 IKBKEQ14164 716 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 CCDC85BQ15834 202 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-206ENST00000395795 PPM1EQ8WY54 764 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 PHKBQ93100 1093 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 EHMT1Q9H9B1 1298 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 ZSWIM6Q9HCJ5 1215 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 JPH1Q9HDC5 661 aaPredicted RBP18.49■□□□□ 0.55
CXCL12-206ENST00000395795 TTC28Q96AY4 2481 aa18.49■□□□□ 0.55
CXCL12-206ENST00000395795 REV3LO60673 3130 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 IGKV6D-21A0A0A0MT36 114 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
CXCL12-206ENST00000395795 PPFIA3O75145 1194 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 REC8O95072 547 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 CYP3A4P08684 503 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 MARK3P27448 753 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 HTRA4P83105 476 aaPredicted RBP18.48■□□□□ 0.55
CXCL12-206ENST00000395795 GRIK4Q16099 956 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 JAKMIP3Q5VZ66 844 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 ERAP1Q9NZ08 941 aa18.48■□□□□ 0.55
CXCL12-206ENST00000395795 SLC9A2Q9UBY0 812 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms