RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PCDHA11Q9Y5I1 949 aa10.17□□□□□ -0.78
ATG4A-205ENST00000394892 LCHNA4D1U4 455 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 RFXAPO00287 272 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 DTNBO60941 627 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 ACTN1P12814 892 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 RCAN1P53805 252 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 EVCP57679 992 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 WDR5P61964 334 aaKnown RBP10.16□□□□□ -0.78
ATG4A-205ENST00000394892 NEDD9Q14511 834 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 KRT32Q14532 448 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 UTP14CQ5TAP6 766 aaKnown RBP10.16□□□□□ -0.78
ATG4A-205ENST00000394892 RUFY4Q6ZNE9 571 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 MICALL1Q8N3F8 863 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 KATNAL1Q9BW62 490 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 NCOA5Q9HCD5 579 aaKnown RBP10.16□□□□□ -0.78
ATG4A-205ENST00000394892 FOXD4L1Q9NU39 408 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 NOD1Q9Y239 953 aa10.16□□□□□ -0.78
ATG4A-205ENST00000394892 C17orf102A2RUQ5 167 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 SMCO2A6NFE2 343 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 KIF28PB7ZC32 967 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 MEIS1O00470 390 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 CA3P07451 260 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 PDIA3P30101 505 aaKnown RBP10.15□□□□□ -0.78
ATG4A-205ENST00000394892 NAPAP54920 295 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 PFKFB3Q16875 520 aaPredicted RBP10.15□□□□□ -0.78
ATG4A-205ENST00000394892 MARCH8Q5T0T0 291 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 BLOC1S2Q6QNY1 142 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 SYNE3Q6ZMZ3 975 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.15□□□□□ -0.78
ATG4A-205ENST00000394892 HERC6Q8IVU3 1022 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 LMBR1Q8WVP7 490 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 PHKBQ93100 1093 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 UIMC1Q96RL1 719 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 MXRA8Q9BRK3 442 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 ANO3Q9BYT9 981 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 FTOQ9C0B1 505 aaKnown RBP eCLIP10.15□□□□□ -0.78
ATG4A-205ENST00000394892 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 KCNH7Q9NS40 1196 aa10.15□□□□□ -0.78
ATG4A-205ENST00000394892 KIAA1217Q5T5P2 1943 aa10.15□□□□□ -0.79
ATG4A-205ENST00000394892 TET1Q8NFU7 2136 aa10.15□□□□□ -0.79
ATG4A-205ENST00000394892 SCN5AQ14524 2016 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 IGLV3-22A0A075B6J6 115 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 DHX15O43143 795 aaKnown RBP10.14□□□□□ -0.79
ATG4A-205ENST00000394892 PRPF3O43395 683 aaKnown RBP10.14□□□□□ -0.79
ATG4A-205ENST00000394892 LGR5O75473 907 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 CCNE2O96020 404 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
ATG4A-205ENST00000394892 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 SCG2P13521 617 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 TCF7P36402 384 aaPredicted RBP10.14□□□□□ -0.79
ATG4A-205ENST00000394892 SREBF1P36956 1147 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 PLA2G5P39877 138 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 THPOP40225 353 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 METAP2P50579 478 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATG4A-205ENST00000394892 ADCY7P51828 1080 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 TAP1Q03518 808 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 MTMR1Q13613 665 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 JAKMIP3Q5VZ66 844 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 KRT40Q6A162 431 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 NLRX1Q86UT6 975 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 DBF4BQ8NFT6 615 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 RASGRP4Q8TDF6 673 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 ATP6V0A1Q93050 837 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 CERS4Q9HA82 394 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 AGO4Q9HCK5 861 aaKnown RBP10.14□□□□□ -0.79
ATG4A-205ENST00000394892 TTC28Q96AY4 2481 aa10.14□□□□□ -0.79
ATG4A-205ENST00000394892 MBLAC1A4D2B0 266 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-205ENST00000394892 SPDYE3A6NKU9 549 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 RSPH10B2B2RC85 870 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 NOP56O00567 594 aaKnown RBP10.13□□□□□ -0.79
ATG4A-205ENST00000394892 LPXNO60711 386 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 ATG7O95352 703 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 CHRNA1P02708 482 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 CTSHP09668 335 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 RSPH10BP0C881 870 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 MARK3P27448 753 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 CCT2P78371 535 aaKnown RBP10.13□□□□□ -0.79
ATG4A-205ENST00000394892 ARHGAP4P98171 946 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 NPY5RQ15761 445 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 CEP55Q53EZ4 464 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 PLEKHG4Q58EX7 1191 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 FAM26DQ5JW98 314 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 CNKSR3Q6P9H4 555 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 RUFY3Q7L099 469 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 PHOSPHO2Q8TCD6 241 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 SEPT1Q8WYJ6 367 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 LENG9Q96B70 501 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 SLC9A7Q96T83 725 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 UPF3BQ9BZI7 483 aaKnown RBP10.13□□□□□ -0.79
ATG4A-205ENST00000394892 ZMYND12Q9H0C1 365 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
ATG4A-205ENST00000394892 COG5Q9UP83 839 aa10.13□□□□□ -0.79
ATG4A-205ENST00000394892 IGKV6D-21A0A0A0MT36 114 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-205ENST00000394892 ESYT2A0FGR8 921 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 hCG_1984214I3L0E3 225 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 BAIAP3O94812 1187 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 REC8O95072 547 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms