RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MOCS3O95396 460 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 TRIM21P19474 475 aaKnown RBP20.66■□□□□ 0.9
HOXC6-202ENST00000394331 HSD17B3P37058 310 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 PAPOLAP51003 745 aaKnown RBP20.66■□□□□ 0.9
HOXC6-202ENST00000394331 EVX2Q03828 476 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 CUL1Q13616 776 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 CCDC178Q5BJE1 867 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 ISCUQ9H1K1 167 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 GNAQP50148 359 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 MTMR3Q13615 1198 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 IRAK4Q9NWZ3 460 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 TAF1P21675 1872 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 GOLGA6L10A0A0M3HER8 536 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 RASSF10A6NK89 507 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 MCM7P33993 719 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 KCNQ4P56696 695 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 THEMIS2Q5TEJ8 643 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 PDXDC2PQ6P474 469 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 ANKS1AQ92625 1134 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 MLXIPQ9HAP2 919 aa20.65■□□□□ 0.9
HOXC6-202ENST00000394331 LONP1P36776 959 aaKnown RBP20.64■□□□□ 0.9
HOXC6-202ENST00000394331 LMNB2Q03252 620 aa20.64■□□□□ 0.9
HOXC6-202ENST00000394331 ERMARDQ5T6L9 678 aa20.64■□□□□ 0.9
HOXC6-202ENST00000394331 BLIDQ8IZY5 108 aa20.64■□□□□ 0.9
HOXC6-202ENST00000394331 ADSSL1Q8N142 457 aa20.64■□□□□ 0.9
HOXC6-202ENST00000394331 TFAP4Q01664 338 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 TBC1D25Q3MII6 688 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 FAM129AQ9BZQ8 928 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 SRP68Q9UHB9 627 aaKnown RBP20.64■□□□□ 0.89
HOXC6-202ENST00000394331 PLAGL2Q9UPG8 496 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 AFF2P51816 1311 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 BHMG1C9JSJ3 638 aaPredicted RBP20.64■□□□□ 0.89
HOXC6-202ENST00000394331 TMOD1P28289 359 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 C12orf60Q5U649 245 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 PIGWQ7Z7B1 504 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 WDR66Q8TBY9 1149 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 YIPF3Q9GZM5 350 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 SMARCAL1Q9NZC9 954 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 MAGEC2Q9UBF1 373 aaPredicted RBP20.64■□□□□ 0.89
HOXC6-202ENST00000394331 L3MBTL1Q9Y468 752 aa20.64■□□□□ 0.89
HOXC6-202ENST00000394331 STXBP3O00186 592 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 CLTAP09496 248 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
HOXC6-202ENST00000394331 CMPK2Q5EBM0 449 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 PAIP2Q9BPZ3 127 aaKnown RBP20.63■□□□□ 0.89
HOXC6-202ENST00000394331 EHD2Q9NZN4 543 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 CNOT8Q9UFF9 292 aaKnown RBP20.63■□□□□ 0.89
HOXC6-202ENST00000394331 PCDHA4Q9UN74 947 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 MYH10P35580 1976 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 DIAPH2O60879 1101 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 COBLO75128 1261 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 USP17L8P0C7I0 530 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 PRCPP42785 496 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 KLHDC7AQ5VTJ3 777 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 PNMA1Q8ND90 353 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 ERGIC2Q96RQ1 377 aa20.63■□□□□ 0.89
HOXC6-202ENST00000394331 PAPOLBQ9NRJ5 636 aaKnown RBP20.63■□□□□ 0.89
HOXC6-202ENST00000394331 ESYT3A0FGR9 886 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 ATP2C2O75185 946 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 CXCR5P32302 372 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 UAP1Q16222 522 aaPredicted RBP20.62■□□□□ 0.89
HOXC6-202ENST00000394331 MTHFD1LQ6UB35 978 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 ZNF317Q96PQ6 595 aaPredicted RBP20.62■□□□□ 0.89
HOXC6-202ENST00000394331 XPO6Q96QU8 1125 aaKnown RBP20.62■□□□□ 0.89
HOXC6-202ENST00000394331 ZSCAN5CA6NGD5 496 aaPredicted RBP20.62■□□□□ 0.89
HOXC6-202ENST00000394331 RPN1P04843 607 aaKnown RBP20.62■□□□□ 0.89
HOXC6-202ENST00000394331 LDHBP07195 334 aaKnown RBP20.62■□□□□ 0.89
HOXC6-202ENST00000394331 ATP4AP20648 1035 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 TNNC1P63316 161 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 GALNT15Q8N3T1 639 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 STAMQ92783 540 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 PANK4Q9NVE7 773 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 ANKIB1Q9P2G1 1089 aa20.62■□□□□ 0.89
HOXC6-202ENST00000394331 CAND2O75155 1236 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 NQO1P15559 274 aaKnown RBP20.61■□□□□ 0.89
HOXC6-202ENST00000394331 ECHS1P30084 290 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 TM4SF1P30408 202 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 GSTO1P78417 241 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 PDIA5Q14554 519 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 IL17AQ16552 155 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 SMIM5Q71RC9 77 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 PNMA8AQ86V59 439 aaPredicted RBP20.61■□□□□ 0.89
HOXC6-202ENST00000394331 TXNRD3Q86VQ6 643 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 NOX5Q96PH1 765 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 TSC22D3Q99576 134 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 BLZF1Q9H2G9 400 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 PHF20L1A8MW92 1017 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 B4DLN1 442 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 CES2O00748 559 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 GNPATO15228 680 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 BAG3O95817 575 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 VEGFAP15692 232 aaPredicted RBP20.61■□□□□ 0.89
HOXC6-202ENST00000394331 CTNNA1P35221 906 aaKnown RBP20.61■□□□□ 0.89
HOXC6-202ENST00000394331 KIF11P52732 1056 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 ZNF131P52739 623 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 GRM4Q14833 912 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 GALNT17Q6IS24 598 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 RPUSD2Q8IZ73 545 aaKnown RBP20.61■□□□□ 0.89
HOXC6-202ENST00000394331 MKNK2Q9HBH9 465 aa20.61■□□□□ 0.89
HOXC6-202ENST00000394331 IRS2Q9Y4H2 1338 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms