RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 SLC4A7Q9Y6M7 1214 aa18.37■□□□□ 0.53
TGFA-202ENST00000394241 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.36■□□□□ 0.53
TGFA-202ENST00000394241 TRANK1O15050 2925 aa18.36■□□□□ 0.53
TGFA-202ENST00000394241 GTPBP6O43824 516 aaPredicted RBP18.36■□□□□ 0.53
TGFA-202ENST00000394241 POU3F3P20264 500 aaPredicted RBP18.36■□□□□ 0.53
TGFA-202ENST00000394241 NONOQ15233 471 aaKnown RBP eCLIP18.36■□□□□ 0.53
TGFA-202ENST00000394241 UMODL1Q5DID0 1318 aa18.36■□□□□ 0.53
TGFA-202ENST00000394241 KCNV1Q6PIU1 500 aa18.36■□□□□ 0.53
TGFA-202ENST00000394241 ALYREFQ86V81 257 aaKnown RBP18.36■□□□□ 0.53
TGFA-202ENST00000394241 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
TGFA-202ENST00000394241 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
TGFA-202ENST00000394241 RTEL1Q9NZ71 1219 aa18.36■□□□□ 0.53
TGFA-202ENST00000394241 MTCH2Q9Y6C9 303 aa18.36■□□□□ 0.53
TGFA-202ENST00000394241 H3BQV1 296 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 NKRFO15226 690 aaKnown RBP eCLIP18.35■□□□□ 0.53
TGFA-202ENST00000394241 FIBPO43427 364 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 TLL1O43897 1013 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 RGS20O76081 388 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 SMPD1P17405 629 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 ZNF76P36508 570 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 NR5A1Q13285 461 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 GNL2Q13823 731 aaKnown RBP18.35■□□□□ 0.53
TGFA-202ENST00000394241 DUSP28Q4G0W2 176 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 TLK2Q86UE8 772 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 TBCKQ8TEA7 893 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 CRYGNQ8WXF5 182 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 GPRASP2Q96D09 838 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 CDHR1Q96JP9 859 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 UBIAD1Q9Y5Z9 338 aa18.35■□□□□ 0.53
TGFA-202ENST00000394241 FAM86C2PA6NEL3 165 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 BTBD18B2RXH4 712 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 RFXAPO00287 272 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 ARIH2O95376 493 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 CYP3A4P08684 503 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 TXNP10599 105 aaKnown RBP18.34■□□□□ 0.53
TGFA-202ENST00000394241 PDCP20941 246 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 ICAM3P32942 547 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 CCL23P55773 120 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 MTMR1Q13613 665 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 BECN1Q14457 450 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 CEP55Q53EZ4 464 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 PIK3AP1Q6ZUJ8 805 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 KHSRPQ92945 711 aaKnown RBP eCLIP18.34■□□□□ 0.53
TGFA-202ENST00000394241 TNFRSF25Q93038 417 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 MXRA8Q9BRK3 442 aa18.34■□□□□ 0.53
TGFA-202ENST00000394241 GNEQ9Y223 722 aaKnown RBP18.34■□□□□ 0.53
TGFA-202ENST00000394241 ZBBXA8MT70 800 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 TGFB3P10600 412 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 ATP2A2P16615 1042 aaKnown RBP18.33■□□□□ 0.52
TGFA-202ENST00000394241 ITGB5P18084 799 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 SETQ01105 290 aaPredicted RBP18.33■□□□□ 0.52
TGFA-202ENST00000394241 INF2Q27J81 1249 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 LARP1BQ659C4 914 aaKnown RBP18.33■□□□□ 0.52
TGFA-202ENST00000394241 CCDC62Q6P9F0 684 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 RPUSD2Q8IZ73 545 aaKnown RBP18.33■□□□□ 0.52
TGFA-202ENST00000394241 SLC43A3Q8NBI5 491 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 OR6J1Q8NGC5 347 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 AP5M1Q9H0R1 490 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 FOXP1Q9H334 677 aaPredicted RBP18.33■□□□□ 0.52
TGFA-202ENST00000394241 JADE2Q9NQC1 790 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 Q9Y3F1 56 aa18.33■□□□□ 0.52
TGFA-202ENST00000394241 CTAGE5O15320 804 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 UBA1P22314 1058 aaKnown RBP18.32■□□□□ 0.52
TGFA-202ENST00000394241 CIITAP33076 1130 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 USP11P51784 963 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 LY6KQ17RY6 165 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 NEK8Q86SG6 692 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 HLA-CQ95604 372 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
TGFA-202ENST00000394241 WNT8AQ9H1J5 351 aa18.32■□□□□ 0.52
TGFA-202ENST00000394241 DDX41Q9UJV9 622 aaKnown RBP18.32■□□□□ 0.52
TGFA-202ENST00000394241 SPATA31C2B4DYI2 1134 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 FAM86B1E9PN63 330 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 MAFGO15525 162 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 GH1P01241 217 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 CA3P07451 260 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 FAM86B2P0C5J1 330 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 NKX3-2P78367 333 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 BEX3Q00994 111 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 SEMA3FQ13275 785 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 TMEM63BQ5T3F8 832 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 CXCL17Q6UXB2 119 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 COPS5Q92905 334 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 NAP1L4Q99733 375 aaKnown RBP18.31■□□□□ 0.52
TGFA-202ENST00000394241 CERS4Q9HA82 394 aa18.31■□□□□ 0.52
TGFA-202ENST00000394241 IGLV3-22A0A075B6J6 115 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 FAM205CA6NFA0 338 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 PI4K2BG5E9Z4 385 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 MEIS1O00470 390 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 DYNC1LI2O43237 492 aaPredicted RBP18.3■□□□□ 0.52
TGFA-202ENST00000394241 CABYRO75952 493 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 GGPS1O95749 300 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 PTGS1P23219 599 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 ITGA7Q13683 1181 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 NEDD9Q14511 834 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 LETM2Q2VYF4 491 aa18.3■□□□□ 0.52
TGFA-202ENST00000394241 EARS2Q5JPH6 523 aaKnown RBP18.3■□□□□ 0.52
TGFA-202ENST00000394241 MCTP1Q6DN14 999 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms