RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 CCDC178Q5BJE1 867 aa12.57□□□□□ -0.4
PDCD4-202ENST00000393104 IFT20Q8IY31 132 aa12.57□□□□□ -0.4
PDCD4-202ENST00000393104 OTUD6BQ8N6M0 293 aa12.57□□□□□ -0.4
PDCD4-202ENST00000393104 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
PDCD4-202ENST00000393104 TLCD1Q96CP7 247 aa12.57□□□□□ -0.4
PDCD4-202ENST00000393104 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDCD4-202ENST00000393104 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
PDCD4-202ENST00000393104 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
PDCD4-202ENST00000393104 SLC37A4O43826 429 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 APBA3O96018 575 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 MTIF2P46199 727 aaKnown RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 INHBEP58166 350 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 IQCEQ6IPM2 695 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 MAGEC3Q8TD91 643 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 HAUS2Q9NVX0 235 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 USP17L3A6NCW0 530 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 USP17L4A6NCW7 530 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 HMGB1P1B2RPK0 211 aaPredicted RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 SCTRP47872 440 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 RNASE9P60153 205 aaKnown RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 ACCSLQ4AC99 568 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 DCAF12L1Q5VU92 463 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 USP17L1Q7RTZ2 530 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 RPAINQ86UA6 219 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 SPATS2Q86XZ4 545 aaKnown RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 EIF1ADQ8N9N8 165 aaKnown RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 MIEF2Q96C03 454 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 CUEDC2Q9H467 287 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 TAF1DQ9H5J8 278 aaPredicted RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 CHUKO15111 745 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 HOXD13P35453 343 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 LRRC41Q15345 812 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 SPA17Q15506 151 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 GRIK5Q16478 980 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 CFAP221Q4G0U5 840 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 LRIG3Q6UXM1 1119 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 FBXO33Q7Z6M2 555 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 IQCA1Q86XH1 822 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 SYN2Q92777 582 aaPredicted RBP12.56□□□□□ -0.4
PDCD4-202ENST00000393104 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
PDCD4-202ENST00000393104 PRDX5P30044 214 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 TECP42680 631 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 RPS8P62241 208 aaKnown RBP12.55□□□□□ -0.4
PDCD4-202ENST00000393104 SLFN11Q7Z7L1 901 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 SEC16BQ96JE7 1060 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 BICDL2A1A5D9 508 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 BTNL10A8MVZ5 291 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 SERPINB2P05120 415 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 SLC18A3Q16572 532 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 GUF1Q8N442 669 aaKnown RBP12.55□□□□□ -0.4
PDCD4-202ENST00000393104 WHAMMQ8TF30 809 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 ATXN2LQ8WWM7 1075 aaKnown RBP12.55□□□□□ -0.4
PDCD4-202ENST00000393104 KCTD10Q9H3F6 313 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
PDCD4-202ENST00000393104 GMNCA6NCL1 334 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 A6NNZ2 444 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 LAD1O00515 517 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 UBA7P41226 1012 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 MARSP56192 900 aaKnown RBP12.55□□□□□ -0.4
PDCD4-202ENST00000393104 TUBB8Q3ZCM7 444 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 CEP85LQ5SZL2 805 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 FOXR2Q6PJQ5 311 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 ZNF571Q7Z3V5 609 aaPredicted RBP12.55□□□□□ -0.4
PDCD4-202ENST00000393104 TMC3Q7Z5M5 1100 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 NOX5Q96PH1 765 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 MAGEF1Q9HAY2 307 aa12.55□□□□□ -0.4
PDCD4-202ENST00000393104 MAGEC2Q9UBF1 373 aaPredicted RBP12.55□□□□□ -0.4
PDCD4-202ENST00000393104 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 PAK2Q13177 524 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 SLC4A8Q2Y0W8 1093 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 TMEM119Q4V9L6 283 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 RASGEF1CQ8N431 466 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 GJA10Q969M2 543 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 AK8Q96MA6 479 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 MMRN2Q9H8L6 949 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 PPANQ9NQ55 473 aaKnown RBP12.54□□□□□ -0.4
PDCD4-202ENST00000393104 ZDHHC18Q9NUE0 388 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 RNF14Q9UBS8 474 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 PHF20L1A8MW92 1017 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 E7EVH7 732 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 CES2O00748 559 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 USO1O60763 962 aaKnown RBP12.54□□□□□ -0.4
PDCD4-202ENST00000393104 OR52Z1P0C646 297 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 ELF1P32519 619 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 ASIC1P78348 528 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 TNFAIP8L3Q5GJ75 292 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 UNC13DQ70J99 1090 aa12.54□□□□□ -0.4
PDCD4-202ENST00000393104 COL23A1Q86Y22 540 aaPredicted RBP12.54□□□□□ -0.4
PDCD4-202ENST00000393104 TRIM59Q8IWR1 403 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms