RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 POTEIP0CG38 1075 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 IARSP41252 1262 aaKnown RBP8.26□□□□□ -1.09
VTI1A-201ENST00000393077 RPS6KA1Q15418 735 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 NFRKBQ6P4R8 1299 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 PEX5LQ8IYB4 626 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 NSUN7Q8NE18 718 aaKnown RBP8.26□□□□□ -1.09
VTI1A-201ENST00000393077 STK32AQ8WU08 396 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CCT7Q99832 543 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 ARPC5LQ9BPX5 153 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 NRDE2Q9H7Z3 1164 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 LRWD1Q9UFC0 647 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 MAPK8IP1Q9UQF2 711 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 ANKARQ7Z5J8 1434 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 ADGRL3Q9HAR2 1447 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 H7C1W4 665 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 PSMA7O14818 248 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 NOL3O60936 208 aaKnown RBP8.26□□□□□ -1.09
VTI1A-201ENST00000393077 FGFR1OPO95684 399 aaKnown RBP8.26□□□□□ -1.09
VTI1A-201ENST00000393077 DCTN2Q13561 401 aaKnown RBP8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CUL1Q13616 776 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 SLC39A14Q15043 492 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 QPCTQ16769 361 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 AGBL2Q5U5Z8 902 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CCT6BQ92526 530 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 CAVIN3Q969G5 261 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 SUCLG2Q96I99 432 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 TMBIM4Q9HC24 238 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 PCMTD2Q9NV79 361 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 MTMR7Q9Y216 660 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 TMED5Q9Y3A6 229 aa8.26□□□□□ -1.09
VTI1A-201ENST00000393077 PASKQ96RG2 1323 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 KCNJ18B7U540 433 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 WDR46O15213 610 aaKnown RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 SLCO1A2P46721 670 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 TUFMP49411 452 aaKnown RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 SERPINB8P50452 374 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 FXR1P51114 621 aaKnown RBP eCLIP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 PAK1Q13153 545 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 ITGA7Q13683 1181 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 KCNJ12Q14500 433 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 ZNF268Q14587 947 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 LMBRD2Q68DH5 695 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 FAAH2Q6GMR7 532 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 MYOCDQ8IZQ8 938 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 HDAC7Q8WUI4 952 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 MAP4K1Q92918 833 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 PRMT1Q99873 361 aaKnown RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 PAGR1Q9BTK6 254 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 DCLRE1BQ9H816 532 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 DDX18Q9NVP1 670 aaKnown RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 ARHGEF38Q9NXL2 777 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 SUN2Q9UH99 717 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 GMEB1Q9Y692 573 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 LRRC7Q96NW7 1537 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 A6NHS1 94 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 KCNK3O14649 394 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 IFIT3O14879 490 aaKnown RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 MAPK13O15264 365 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 NECTIN1Q15223 517 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 SLC9C2Q5TAH2 1124 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 SPATA31D1Q6ZQQ2 1576 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 C2CD5Q86YS7 1000 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 NLRP3Q96P20 1036 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 LRRC37BQ96QE4 947 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 CHP1Q99653 195 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 Q9H521 79 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 FBXL5Q9UKA1 691 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 PNMA2Q9UL42 364 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 KIAA1210Q9ULL0 1709 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 PHF24Q9UPV7 400 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 ZC3H13Q5T200 1668 aaKnown RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 RICTORQ6R327 1708 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 STAMBPO95630 424 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 KCNA2P16389 499 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 ITIH3Q06033 890 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 NR1I3Q14994 352 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 ANO7Q6IWH7 933 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 SYT15Q9BQS2 421 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 OSBPL10Q9BXB5 764 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.25□□□□□ -1.09
VTI1A-201ENST00000393077 ADCY9O60503 1353 aa8.25□□□□□ -1.09
VTI1A-201ENST00000393077 A0A0U1RQJ8 604 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 ZNF233A6NK53 670 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 KRIT1O00522 736 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 NDC80O14777 642 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 FANCGO15287 622 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 EHHADHQ08426 723 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TFCP2Q12800 502 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 KRT72Q14CN4 511 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 LRRC8BQ6P9F7 803 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 SCUBE1Q8IWY4 988 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 HELBQ8NG08 1087 aaPredicted RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 NELFBQ8WX92 580 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 TBC1D23Q9NUY8 699 aa8.24□□□□□ -1.09
VTI1A-201ENST00000393077 THRAP3Q9Y2W1 955 aaKnown RBP8.24□□□□□ -1.09
VTI1A-201ENST00000393077 MED14O60244 1454 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms